RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TMEM9Q9P0T7 183 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 IKZF2Q9UKS7 526 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 ABCG2Q9UNQ0 655 aa3.87□□□□□ -1.79
VRK1-205ENST00000555402 IGHV3OR16-13A0A075B7E8 117 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 IGKV1D-8A0A087WSZ0 117 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 IGHV1OR21-1A0A087WYE8 117 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 NSG1A0A0A6YYJ2 146 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 CTAGE15A4D2H0 777 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 GOLGA8OA6NCC3 632 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 OR5B21A6NL26 309 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 LOC110117498-PIK3R3F6TDL0 507 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 GOLGA8NF8WBI6 632 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 GFYI3L273 518 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 HSD17B6O14756 317 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 P04436 131 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 TOP1P11387 765 aaKnown RBP3.86□□□□□ -1.79
VRK1-205ENST00000555402 NPR2P20594 1047 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 CASP14P31944 242 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 RGRP47804 291 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 KLK7P49862 253 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 SUCLG1P53597 346 aaKnown RBP3.86□□□□□ -1.79
VRK1-205ENST00000555402 SCRN3Q0VDG4 424 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 EOGTQ5NDL2 527 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 RSBN1Q5VWQ0 802 aaPredicted RBP3.86□□□□□ -1.79
VRK1-205ENST00000555402 KDM7AQ6ZMT4 941 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 CTAGE6Q86UF2 777 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 ZNF740Q8NDX6 193 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 SDR9C7Q8NEX9 313 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 OR1L6Q8NGR2 347 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 SLC2A14Q8TDB8 520 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 BRSK1Q8TDC3 778 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 CHCHD10Q8WYQ3 142 aaPredicted RBP3.86□□□□□ -1.79
VRK1-205ENST00000555402 OXGR1Q96P68 337 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 ANKRD19PQ9H560 264 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 ZDHHC11Q9H8X9 412 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 TM9SF3Q9HD45 589 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 KLHL28Q9NXS3 571 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 SLC7A8Q9UHI5 535 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 KIF25Q9UIL4 384 aa3.86□□□□□ -1.79
VRK1-205ENST00000555402 ADAMTS9Q9P2N4 1935 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 PPIAL4EA0A075B759 164 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 A0A0J9YXY3 114 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 ERICH4A6NGS2 130 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 ABCD4O14678 606 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 KLHL41O60662 606 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 WBP4O75554 376 aaKnown RBP3.85□□□□□ -1.79
VRK1-205ENST00000555402 LY6G6DO95868 133 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 NDUFB10O96000 172 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 TIMP1P01033 207 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 MMP1P03956 469 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 PPIAL4FP0DN26 164 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 GABRR1P24046 479 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 CXCR2P25025 360 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 RBMXP38159 391 aaKnown RBP3.85□□□□□ -1.79
VRK1-205ENST00000555402 OPRD1P41143 372 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 TIMM10P62072 90 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 TGFBR3Q03167 851 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 GK3PQ14409 553 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 PPP1R7Q15435 360 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 FHL5Q5TD97 284 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 C11orf71Q6IPW1 123 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 LRRC74BQ6ZQY2 392 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 C19orf35Q6ZS72 473 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 RDH10Q8IZV5 341 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 C11orf42Q8N5U0 333 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 CCDC71LQ8N9Z2 235 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 FNDC5Q8NAU1 212 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 RASD2Q96D21 266 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 PLEKHA8Q96JA3 519 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 C12orf42Q96LP6 360 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 CNN2Q99439 309 aaKnown RBP3.85□□□□□ -1.79
VRK1-205ENST00000555402 TSG101Q99816 390 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 ARHGDIGQ99819 225 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 RNF167Q9H6Y7 350 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 SH2D2AQ9NP31 389 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 AIG1Q9NVV5 245 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 KCNIP1Q9NZI2 227 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 SPATA7Q9P0W8 599 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 B4GALT7Q9UBV7 327 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 N6AMT1Q9Y5N5 214 aa3.85□□□□□ -1.79
VRK1-205ENST00000555402 RAI1Q7Z5J4 1906 aaPredicted RBP3.85□□□□□ -1.79
VRK1-205ENST00000555402 HEATR9A2RTY3 570 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ZNF716A6NP11 495 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 BOLA2-SMG1P6H3BVE0 249 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ERLIN1O75477 346 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 MMP23AO75900 390 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ZNF735P0CB33 412 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 MCF2P10911 925 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 CD1EP15812 388 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ABOP16442 354 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 TNNI1P19237 187 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 SLC2A5P22732 501 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 COX7A1P24310 79 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 KPNA2P52292 529 aaKnown RBP3.84□□□□□ -1.79
VRK1-205ENST00000555402 RIPPLY3P57055 190 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 TLE4Q04727 773 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 ZNF544Q6NX49 715 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 TMIGD1Q6UXZ0 262 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 SCARA5Q6ZMJ2 495 aa3.84□□□□□ -1.79
VRK1-205ENST00000555402 CDR2LQ86X02 465 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms