RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 IKZF5Q9H5V7 419 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 SLC7A10Q9NS82 523 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 ADPRHL2Q9NX46 363 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 RCE1Q9Y256 329 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 ANGPT4Q9Y264 503 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 B3GALT5Q9Y2C3 310 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 C2CD3Q4AC94 2353 aa10.41□□□□□ -0.74
VRK1-204ENST00000555351 A0A1B0GWA3 101 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 SHISA9B4DS77 424 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 CLOCKO15516 846 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 SASH3O75995 380 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 MFN2O95140 757 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 IGHV3-9P01782 118 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 SH3BGRP55822 239 aaPredicted RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 NCALDP61601 193 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 BNIP2Q12982 314 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 COQ5Q5HYK3 327 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 ALG10BQ5I7T1 473 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 ALKBH2Q6NS38 261 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 DHDDSQ86SQ9 333 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 RANBP3LQ86VV4 465 aaPredicted RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 ARMC8Q8IUR7 673 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 DEPDC4Q8N2C3 294 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 OR52E4Q8NGH9 312 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 MAGEE2Q8TD90 523 aaPredicted RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 DNAJA3Q96EY1 480 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 Q96MF0 132 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 ZNF385AQ96PM9 386 aaKnown RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 EPYCQ99645 322 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 PTDSS2Q9BVG9 487 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 RSPO3Q9BXY4 272 aaPredicted RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 KAT8Q9H7Z6 458 aaKnown RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 TMEM27Q9HBJ8 222 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 NPHS2Q9NP85 383 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 SLC17A5Q9NRA2 495 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 CISD1Q9NZ45 108 aaKnown RBP10.4□□□□□ -0.74
VRK1-204ENST00000555351 NPAP1Q9NZP6 1156 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 SELENONQ9NZV5 590 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 SLC13A4Q9UKG4 626 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 LAMP3Q9UQV4 416 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 CORINQ9Y5Q5 1042 aa10.4□□□□□ -0.74
VRK1-204ENST00000555351 ZNF469Q96JG9 3925 aaPredicted RBP10.39□□□□□ -0.75
VRK1-204ENST00000555351 TRAV36DV7A0A075B6V5 113 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 A0A087WUJ7 227 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 A0A0G2JND7 137 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 RPL36A-HNRNPH2H7BZ11 118 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 ABCD4O14678 606 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 AIM2O14862 343 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 TPST1O60507 370 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 WNT11O96014 354 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 TROVE2P10155 538 aaKnown RBP eCLIP10.39□□□□□ -0.75
VRK1-204ENST00000555351 CD40P25942 277 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 HTR2AP28223 471 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 GTF2E2P29084 291 aaKnown RBP10.39□□□□□ -0.75
VRK1-204ENST00000555351 ATP5J2P56134 94 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 RGS8P57771 180 aaPredicted RBP10.39□□□□□ -0.75
VRK1-204ENST00000555351 PRPS1P60891 318 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 PGGHGQ32M88 737 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 C3orf36Q3SXR2 165 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 INTS11Q5TA45 600 aaKnown RBP10.39□□□□□ -0.75
VRK1-204ENST00000555351 ZNF613Q6PF04 617 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 PATL1Q86TB9 770 aaKnown RBP10.39□□□□□ -0.75
VRK1-204ENST00000555351 GPAT4Q86UL3 456 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 RETREG3Q86VR2 466 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 PTOV1Q86YD1 416 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 EPHX4Q8IUS5 362 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 SCAIQ8N9R8 606 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 WDR31Q8NA23 367 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 KBTBD8Q8NFY9 601 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 RASSF5Q8WWW0 418 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 KTI12Q96EK9 354 aaPredicted RBP10.39□□□□□ -0.75
VRK1-204ENST00000555351 OXGR1Q96P68 337 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 SH3GL1Q99961 368 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 TMEM43Q9BTV4 400 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 TRAF4Q9BUZ4 470 aaPredicted RBP10.39□□□□□ -0.75
VRK1-204ENST00000555351 BARX1Q9HBU1 254 aaPredicted RBP10.39□□□□□ -0.75
VRK1-204ENST00000555351 ACANP16112 2415 aa10.39□□□□□ -0.75
VRK1-204ENST00000555351 A0A0B4J2E0 115 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 A0A1B0GX12 115 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 ZNF587BE7ETH6 402 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 AKAP8O43823 692 aaKnown RBP10.38□□□□□ -0.75
VRK1-204ENST00000555351 ZNF432O94892 652 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 LGI1O95970 557 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 HEXAP06865 529 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 SOD3P08294 240 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 VIMP08670 466 aaKnown RBP10.38□□□□□ -0.75
VRK1-204ENST00000555351 ZNF43P17038 809 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 RPS5P46782 204 aaKnown RBP10.38□□□□□ -0.75
VRK1-204ENST00000555351 CDH11P55287 796 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 FOXG1P55316 489 aaPredicted RBP10.38□□□□□ -0.75
VRK1-204ENST00000555351 HOXC5Q00444 222 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 NFYCQ13952 458 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 CYLC2Q14093 348 aaPredicted RBP10.38□□□□□ -0.75
VRK1-204ENST00000555351 NRF1Q16656 503 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 CYP51A1Q16850 503 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 TRMT5Q32P41 509 aaKnown RBP10.38□□□□□ -0.75
VRK1-204ENST00000555351 AGAP6Q5VW22 663 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 ZNF544Q6NX49 715 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms