RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 COX4I1P13073 169 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 CDH2P19022 906 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-213ENST00000554600 NTF4P34130 210 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 EGR4Q05215 589 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 C1DQ13901 141 aaKnown RBP9.41□□□□□ -0.9
SHMT2-213ENST00000554600 TESK1Q15569 626 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 ACKR1Q16570 336 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 DUSP7Q16829 419 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 DEFB113Q30KQ7 82 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 FAM69AQ5T7M9 428 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 FAM91A1Q658Y4 838 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 C5orf46Q6UWT4 87 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 ZNF704Q6ZNC4 412 aaPredicted RBP9.41□□□□□ -0.9
SHMT2-213ENST00000554600 SPATA21Q7Z572 469 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 KDM8Q8N371 416 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 LSMEM1Q8N8F7 131 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 OR52N5Q8NH56 324 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 RASSF5Q8WWW0 418 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 PROX1Q92786 737 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 TAAR8Q969N4 342 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 TAMM41Q96BW9 452 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 ZNF385AQ96PM9 386 aaKnown RBP9.41□□□□□ -0.9
SHMT2-213ENST00000554600 EPYCQ99645 322 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 CCL19Q99731 98 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 WFDC6Q9BQY6 131 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 NSRP1Q9H0G5 558 aaKnown RBP9.41□□□□□ -0.9
SHMT2-213ENST00000554600 EVA1AQ9H8M9 152 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 SLC7A10Q9NS82 523 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 TAS2R16Q9NYV7 291 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 USP22Q9UPT9 525 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 RASD1Q9Y272 281 aa9.41□□□□□ -0.9
SHMT2-213ENST00000554600 A0A0B4J2E0 115 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 A0A1B0GX12 115 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 A0A1W2PR80 420 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 OR5H1A6NKK0 313 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 M0R082 166 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 NPIPB7O75200 414 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 C8BP07358 591 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 NQO1P15559 274 aaKnown RBP9.4□□□□□ -0.9
SHMT2-213ENST00000554600 ZNF43P17038 809 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 CD53P19397 219 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 COX5AP20674 150 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 CD247P20963 164 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 LOXP28300 417 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-213ENST00000554600 GRPRP30550 384 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 HOXC12P31275 282 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 SEC24CP53992 1094 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 CDH12P55289 794 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 FOXG1P55316 489 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-213ENST00000554600 CLDN17P56750 224 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 BSPH1Q075Z2 132 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 NRF1Q16656 503 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 LRRC23Q53EV4 343 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-213ENST00000554600 ENTPD8Q5MY95 495 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 TIMM23BQ5SRD1 257 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 TSPO2Q5TGU0 170 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 NIPAL3Q6P499 406 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 ERICH5Q6P6B1 374 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 C6orf89Q6UWU4 347 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 SPNS3Q6ZMD2 512 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 CPLX4Q7Z7G2 160 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 RBM45Q8IUH3 476 aaKnown RBP9.4□□□□□ -0.9
SHMT2-213ENST00000554600 GPR32P1Q8NGA4 272 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 OR6T1Q8NGN1 323 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 RP9Q8TA86 221 aaKnown RBP9.4□□□□□ -0.9
SHMT2-213ENST00000554600 ZNF417Q8TAU3 575 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 PIGTQ969N2 578 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 TMEM45BQ96B21 275 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 MBD6Q96DN6 1003 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 ALPK1Q96QP1 1244 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 ZNF587Q96SQ5 575 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-213ENST00000554600 ARHGDIGQ99819 225 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 PTDSS2Q9BVG9 487 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 SLCO5A1Q9H2Y9 848 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 SEC14L4Q9UDX3 406 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 MALT1Q9UDY8 824 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 RNF115Q9Y4L5 304 aa9.4□□□□□ -0.9
SHMT2-213ENST00000554600 IGKV1D-42A0A075B6H8 117 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 A0A087WUJ7 227 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 FTCDNL1E5RQL4 147 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 GSTA4O15217 222 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 TPST2O60704 377 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 SMPD2O60906 423 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 SERPINI2O75830 405 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 IFNA14P01570 189 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ITGA5P08648 1049 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 SELENOPP49908 381 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 GZMMP51124 257 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF83P51522 516 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 TGFBR3Q03167 851 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 FOXD4Q12950 439 aaPredicted RBP9.39□□□□□ -0.91
SHMT2-213ENST00000554600 MFSD13AQ14CX5 517 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 NCMAPQ5T1S8 102 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 OR7E24Q6IFN5 339 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ADAM5Q6NVV9 412 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 ZNF613Q6PF04 617 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 KLHL24Q6TFL4 600 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 DEF8Q6ZN54 512 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 C20orf204Q6ZNR8 217 aa9.39□□□□□ -0.91
SHMT2-213ENST00000554600 CREB3L2Q70SY1 520 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms