RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 FAM98AQ8NCA5 519 aaKnown RBP11.27□□□□□ -0.61
SHMT2-207ENST00000553837 BBS1Q8NFJ9 593 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 OR4K14Q8NGD5 310 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 OR5T3Q8NGG3 340 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 TCEAL3Q969E4 200 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 MS4A4EQ96PG1 132 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 GAS2L1Q99501 681 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-207ENST00000553837 GAREM1Q9H706 876 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 NANSQ9NR45 359 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 H2AFY2Q9P0M6 372 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-207ENST00000553837 DUX4Q9UBX2 424 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 EPHA6Q9UF33 1036 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 MLXQ9UH92 298 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 KCNE5Q9UJ90 142 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 EDARQ9UNE0 448 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 WRBO00258 174 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 HCRTR1O43613 425 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 LDB3O75112 727 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 CTSBP07858 339 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 CELA2BP08218 269 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 PPP3CBP16298 524 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 CD53P19397 219 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 FUT1P19526 365 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 NDUFS1P28331 727 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 HTR1FP30939 366 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 PSMD4P55036 377 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 OR10A3P58181 314 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 PSMA6P60900 246 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 PPP1CAP62136 330 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 FGL1Q08830 312 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 ST3GAL3Q11203 375 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 HTR4Q13639 388 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 GK2Q14410 553 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 KIR2DS3Q14952 304 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 TMUB2Q71RG4 321 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 OR6V1Q8N148 313 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF565Q8N9K5 539 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 HAVCR2Q8TDQ0 301 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 CNOT9Q92600 299 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 MRPS24Q96EL2 167 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SLC41A3Q96GZ6 507 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SERINC2Q96SA4 455 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SDF2Q99470 211 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 MED11Q9P086 117 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 GPR160Q9UJ42 338 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 PURGQ9UJV8 347 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SLC13A4Q9UKG4 626 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 NPFFR2Q9Y5X5 522 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SLC22A7Q9Y694 548 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 TRIOO75962 3097 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 NPIPA5A0A0B4J1W7 369 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 NAP1L6A6NFF2 107 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 NPIPA7E9PJI5 369 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 H0YGG7 62 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 CTDSPLO15194 276 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 FGF17O60258 216 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SUSD5O60279 629 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 EIF1BO60739 113 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 GALR3O60755 368 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 KDM4BO94953 1096 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 OR2A4O95047 310 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 APBB3O95704 486 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 NPIPA8P0DM63 369 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 CPMP14384 443 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 GABRA1P14867 456 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 IFNGR1P15260 489 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 EIF1P41567 113 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 ARF3P61204 181 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SEC61A1P61619 476 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 EEF1A1P68104 462 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 DECR1Q16698 335 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 ARHGAP11BQ3KRB8 267 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SFRP4Q6FHJ7 346 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 WDR88Q6ZMY6 472 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 MEIOBQ8N635 442 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 OR11G2Q8NGC1 345 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 OR1S1Q8NH92 325 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 PIGXQ8TBF5 258 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 ACOT11Q8WXI4 607 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 FAM3CQ92520 227 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 LRRC46Q96FV0 321 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 OR2A7Q96R45 310 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 PRSS27Q9BQR3 290 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 TINAGL1Q9GZM7 467 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 ESRP2Q9H6T0 727 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 ISG20L2Q9H9L3 353 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 MED17Q9NVC6 651 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 CALML5Q9NZT1 146 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 AKAP7Q9P0M2 348 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 SLC7A7Q9UM01 511 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 WDR45Q9Y484 360 aa11.26□□□□□ -0.61
SHMT2-207ENST00000553837 PCDHGA9Q9Y5G4 932 aaKnown RBP11.26□□□□□ -0.61
SHMT2-207ENST00000553837 LRP4O75096 1905 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 A0A0G2JK05 382 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 HMSDA8MTL9 139 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 SURF4O15260 269 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 CBX7O95931 251 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 HIST1H2ABP04908 130 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 GKN3PP0CG01 181 aa11.25□□□□□ -0.61
SHMT2-207ENST00000553837 SAGP10523 405 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms