RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ANKRD27Q96NW4 1050 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 TAPBPLQ9BX59 468 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 GSX2Q9BZM3 304 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 TMEM38AQ9H6F2 299 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 THUMPD1Q9NXG2 353 aaKnown RBP15.98■□□□□ 0.15
SHMT2-206ENST00000553529 UPB1Q9UBR1 384 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 NDUFAF1Q9Y375 327 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 GMEB1Q9Y692 573 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 MTORP42345 2549 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 ELOA3DA6NLF2 546 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-206ENST00000553529 E7EQL1 145 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 M0R082 166 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 SEC14L2O76054 403 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 HLA-DOBP13765 273 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 GZMMP51124 257 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 ATP5J2P56134 94 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 PCBP3P57721 371 aaKnown RBP15.97■□□□□ 0.15
SHMT2-206ENST00000553529 NFYCQ13952 458 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 DUSP7Q16829 419 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 ELOA3BQ3SY89 546 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 RABL3Q5HYI8 236 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 PHYHD1Q5SRE7 291 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 NIPAL3Q6P499 406 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 WDR88Q6ZMY6 472 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 ELOA3Q8NG57 546 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 VANGL1Q8TAA9 524 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-206ENST00000553529 ZNF417Q8TAU3 575 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 TMEM45BQ96B21 275 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 COX4I2Q96KJ9 171 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 MUS81Q96NY9 551 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 MOGAT1Q96PD6 335 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 ZNF587Q96SQ5 575 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-206ENST00000553529 ZNF701Q9NV72 531 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-206ENST00000553529 ARID1AO14497 2285 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 C2CD3Q4AC94 2353 aa15.97■□□□□ 0.15
SHMT2-206ENST00000553529 A0A096LPE4 126 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 A0A1W2PPZ6 126 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 OVOL3O00110 214 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 FXYD1O00168 92 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 ANGPT2O15123 496 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 AHSA1O95433 338 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 CNOT4O95628 575 aaKnown RBP15.96■□□□□ 0.15
SHMT2-206ENST00000553529 TNFRSF1BP20333 461 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 SLC6A2P23975 617 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 CD40P25942 277 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 GRPRP30550 384 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 CLDN17P56750 224 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 RGS8P57771 180 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-206ENST00000553529 RPS4XP62701 263 aaKnown RBP15.96■□□□□ 0.15
SHMT2-206ENST00000553529 OR1Q1Q15612 314 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 CYP51A1Q16850 503 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 ALG10BQ5I7T1 473 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 TMEM225Q6GV28 225 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 C6orf89Q6UWU4 347 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 MYPOPQ86VE0 399 aaPredicted RBP15.96■□□□□ 0.15
SHMT2-206ENST00000553529 ARMC8Q8IUR7 673 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 DPP10Q8N608 796 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 HIPK4Q8NE63 616 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 OR10A6Q8NH74 314 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 TAMM41Q96BW9 452 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 MUCL1Q96DR8 90 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 AMBRA1Q9C0C7 1298 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 SLCO5A1Q9H2Y9 848 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 NELFAQ9H3P2 528 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 CACYBPQ9HB71 228 aaKnown RBP15.96■□□□□ 0.15
SHMT2-206ENST00000553529 SLC17A5Q9NRA2 495 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 CISD1Q9NZ45 108 aaKnown RBP15.96■□□□□ 0.15
SHMT2-206ENST00000553529 KLHL14Q9P2G3 628 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 RPS6KB2Q9UBS0 482 aa15.96■□□□□ 0.15
SHMT2-206ENST00000553529 A0A0B4J2E0 115 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 A0A1B0GX12 115 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 ZNF503-AS2A6NEH8 195 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 M0QX08 132 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 LYPD3O95274 346 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 IGHV4-39P01824 125 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 CD247P20963 164 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 FKBP2P26885 142 aaKnown RBP15.95■□□□□ 0.14
SHMT2-206ENST00000553529 CDH12P55289 794 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 CLEC9AQ6UXN8 241 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 OR6T1Q8NGN1 323 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 MFSD8Q8NHS3 518 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 STK35Q8TDR2 534 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 ARHGDIGQ99819 225 aa15.95■□□□□ 0.14
SHMT2-206ENST00000553529 TRAF4Q9BUZ4 470 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-206ENST00000553529 KAT8Q9H7Z6 458 aaKnown RBP15.95■□□□□ 0.14
SHMT2-206ENST00000553529 CPSF4LA6NMK7 179 aaKnown RBP15.94■□□□□ 0.14
SHMT2-206ENST00000553529 EVPLLA8MZ36 301 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 ATP6V1G2-DDX39BF2Z307 99 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 ARHGEF9O43307 516 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 SHOX2O60902 331 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-206ENST00000553529 BGLAPP02818 100 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 FUT4P22083 530 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 PPIBP23284 216 aaKnown RBP15.94■□□□□ 0.14
SHMT2-206ENST00000553529 ACVR1BP36896 505 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 TNK1Q13470 666 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 CARD17Q5XLA6 110 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 REP15Q6BDI9 236 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 LSMEM1Q8N8F7 131 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 EMC6Q9BV81 110 aa15.94■□□□□ 0.14
SHMT2-206ENST00000553529 SF3B5Q9BWJ5 86 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms