RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 GTF2H4Q92759 462 aa11.17□□□□□ -0.62
LINC00643-202ENST00000553426 TLCD1Q96CP7 247 aa11.17□□□□□ -0.62
LINC00643-202ENST00000553426 SLC25A36Q96CQ1 311 aa11.17□□□□□ -0.62
LINC00643-202ENST00000553426 SPATA5L1Q9BVQ7 753 aa11.17□□□□□ -0.62
LINC00643-202ENST00000553426 MOV10Q9HCE1 1003 aaKnown RBP11.17□□□□□ -0.62
LINC00643-202ENST00000553426 BCL2L10Q9HD36 194 aa11.17□□□□□ -0.62
LINC00643-202ENST00000553426 TCF7L2Q9NQB0 619 aa11.17□□□□□ -0.62
LINC00643-202ENST00000553426 YAE1D1Q9NRH1 226 aa11.17□□□□□ -0.62
LINC00643-202ENST00000553426 PCDHB14Q9Y5E9 798 aa11.17□□□□□ -0.62
LINC00643-202ENST00000553426 H7C417 338 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 IFNA2P01563 188 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 CSF3P09919 207 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 PRG2P13727 222 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 ETS2P15036 469 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 SLC25A16P16260 332 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 ZNF43P17038 809 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 PPIBP23284 216 aaKnown RBP11.16□□□□□ -0.62
LINC00643-202ENST00000553426 KRTAP1-1Q07627 177 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 HIKESHIQ53FT3 197 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 C11orf71Q6IPW1 123 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 HMBOX1Q6NT76 420 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 EPGNQ6UW88 154 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 C5orf46Q6UWT4 87 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 CREB3L2Q70SY1 520 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 MAVSQ7Z434 540 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 MFSD8Q8NHS3 518 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 LRRC8CQ8TDW0 803 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 FAM168AQ92567 244 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 C3orf49Q96BT1 292 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 ZNF317Q96PQ6 595 aaPredicted RBP11.16□□□□□ -0.62
LINC00643-202ENST00000553426 A4GALTQ9NPC4 353 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 SELENONQ9NZV5 590 aa11.16□□□□□ -0.62
LINC00643-202ENST00000553426 FBN1P35555 2871 aaKnown RBP11.16□□□□□ -0.62
LINC00643-202ENST00000553426 PLCE1Q9P212 2302 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 RTTNQ86VV8 2226 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 IGHV4-30-2A0A087WSY4 118 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 A8MV72 311 aaPredicted RBP11.15□□□□□ -0.62
LINC00643-202ENST00000553426 OR2T1O43869 369 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 CRYAAP02489 173 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 RPS5P46782 204 aaKnown RBP11.15□□□□□ -0.62
LINC00643-202ENST00000553426 SELENOPP49908 381 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 EFNA4P52798 201 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 SH3BGRP55822 239 aaPredicted RBP11.15□□□□□ -0.62
LINC00643-202ENST00000553426 NCALDP61601 193 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 C1DQ13901 141 aaKnown RBP11.15□□□□□ -0.62
LINC00643-202ENST00000553426 TBRG1Q3YBR2 411 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 NIPAL3Q6P499 406 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 SLC2A7Q6PXP3 512 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 B3GLCTQ6Y288 498 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 OR10H5Q8NGA6 315 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 OR1K1Q8NGR3 316 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 DNAJA4Q8WW22 397 aaPredicted RBP11.15□□□□□ -0.62
LINC00643-202ENST00000553426 MAL2Q969L2 176 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 FBXO17Q96EF6 278 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 BOD1Q96IK1 185 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 C7orf26Q96N11 449 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 ALKBH3Q96Q83 286 aaPredicted RBP11.15□□□□□ -0.62
LINC00643-202ENST00000553426 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
LINC00643-202ENST00000553426 PAIP1Q9H074 479 aaKnown RBP11.15□□□□□ -0.62
LINC00643-202ENST00000553426 C12orf10Q9HB07 376 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 SLC13A4Q9UKG4 626 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 CORO2BQ9UQ03 480 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 FKBP7Q9Y680 259 aa11.15□□□□□ -0.62
LINC00643-202ENST00000553426 VSTM5A8MXK1 200 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 TMEM229AB2RXF0 380 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 ATP6V1G2-DDX39BF2Z307 99 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 AIM2O14862 343 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 AKAP8O43823 692 aaKnown RBP11.14□□□□□ -0.63
LINC00643-202ENST00000553426 NPIPB7O75200 414 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 LGI1O95970 557 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 NUDT7P0C024 238 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 PNMTP11086 282 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 BMP2P12643 396 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 HOXB1P14653 301 aaPredicted RBP11.14□□□□□ -0.63
LINC00643-202ENST00000553426 PRKAR1BP31321 381 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 MRPL19P49406 292 aaKnown RBP11.14□□□□□ -0.63
LINC00643-202ENST00000553426 P2RY4P51582 365 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 CLDN17P56750 224 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 SNRPD2P62316 118 aaKnown RBP11.14□□□□□ -0.63
LINC00643-202ENST00000553426 SLC25A3Q00325 362 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 IL1RL1Q01638 556 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 CHRFAM7AQ494W8 412 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 BEND6Q5SZJ8 279 aaPredicted RBP11.14□□□□□ -0.63
LINC00643-202ENST00000553426 GCNT6Q5T4J0 391 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 AGBL2Q5U5Z8 902 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 REEP3Q6NUK4 255 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 ANKRD16Q6P6B7 361 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 NET1Q7Z628 596 aaPredicted RBP11.14□□□□□ -0.63
LINC00643-202ENST00000553426 GPR137CQ8N3F9 429 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 ZNF525Q8N782 197 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 ANKK1Q8NFD2 765 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 BHLHE22Q8NFJ8 381 aaPredicted RBP11.14□□□□□ -0.63
LINC00643-202ENST00000553426 DYDC1Q8WWB3 177 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 SLC38A4Q969I6 547 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 SPDL1Q96EA4 605 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 OXGR1Q96P68 337 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 SLC38A2Q96QD8 506 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 TNFRSF13CQ96RJ3 184 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 ZNF607Q96SK3 696 aa11.14□□□□□ -0.63
LINC00643-202ENST00000553426 LINC00470Q9BZP3 86 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms