RNA–Protein interactions for RNA: ENST00000553410.1

AC107958.3-201, humanhuman

TSL 3 BASIC

Gene AC107958.3, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC107958.3-201ENST00000553410 SYNE1Q8NF91 8797 aaKnown RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 IGLV10-54A0A075B6I4 117 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 CENPVL3A0A0U1RRI6 287 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 MRPS12O15235 138 aaKnown RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 TAPBPO15533 448 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 ASGR1P07306 291 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 ZNF735P0CB33 412 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 CLUP10909 449 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 ZNF35P13682 527 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 XRCC1P18887 633 aaPredicted RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 MARCKSP29966 332 aaPredicted RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 COPB2P35606 906 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 SERPINH1P50454 418 aaKnown RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 ERFP50548 548 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 CCL11P51671 97 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 EMP2P54851 167 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 ASIC1P78348 528 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 KRT83P78385 493 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 RIPPLY1Q0D2K3 151 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 PTK6Q13882 451 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 LAGE3Q14657 143 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 ZBED5Q49AG3 693 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 CCDC158Q5M9N0 1113 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 FAHD2BQ6P2I3 314 aaPredicted RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 PET117Q6UWS5 81 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 C16orf47Q6ZP98 133 aaPredicted RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 GET4Q7L5D6 327 aaPredicted RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 VPS36Q86VN1 386 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 METTL23Q86XA0 190 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 COQ8AQ8NI60 647 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 PHYHIPQ92561 330 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 FAHD2AQ96GK7 314 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 WFIKKN1Q96NZ8 548 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 TXLNGYQ9BZA5 131 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 GCOM2Q9BZD3 368 aaPredicted RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 NACA2Q9H009 215 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 SYNDIG1Q9H7V2 258 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 ZNF490Q9ULM2 529 aaPredicted RBP-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 OR51B4Q9Y5P0 310 aa-0.33□□□□□ -2.46
AC107958.3-201ENST00000553410 IGHV3-74A0A0B4J1X5 117 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 ZNF320A2RRD8 509 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 ZNF716A6NP11 495 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 TPD52L2O43399 206 aaKnown RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 PRKYO43930 277 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 GCM2O75603 506 aaPredicted RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 GLSO94925 669 aaPredicted RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 GABARAPO95166 117 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 ZNF688P0C7X2 276 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 IGHV3-43DP0DP04 118 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 BDNFP23560 247 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 G6PCP35575 357 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 UQCRFS1P47985 274 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 PRKXP51817 358 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 OSTNP61366 133 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 NTHL1P78549 312 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 SLC7A9P82251 487 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 TSPY1Q01534 308 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 PRDX4Q13162 271 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 TMEM52BQ4KMG9 183 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 STUMQ69YW2 141 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 OR2A2Q6IF42 318 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 CAVIN1Q6NZI2 390 aaKnown RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 PRMT9Q6P2P2 845 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 Q6ZN92 141 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 APTXQ7Z2E3 356 aaKnown RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 C15orf54Q8N8G6 183 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 SHC3Q92529 594 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 N4BP2L2Q92802 583 aaPredicted RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 DUS3LQ96G46 650 aaKnown RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 NAP1L4Q99733 375 aaKnown RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 RHOXF2Q9BQY4 288 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 CBWD1Q9BRT8 395 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 RANBP3Q9H6Z4 567 aaPredicted RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 SUDS3Q9H7L9 328 aaPredicted RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 FOLH1BQ9HBA9 442 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 POLD4Q9HCU8 107 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 IL26Q9NPH9 171 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 UTP6Q9NYH9 597 aaKnown RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 ATP10DQ9P241 1426 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 BCAP29Q9UHQ4 241 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 RPH3ALQ9UNE2 315 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 OARD1Q9Y530 152 aa-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 F11RQ9Y624 299 aaKnown RBP-0.34□□□□□ -2.46
AC107958.3-201ENST00000553410 IGKV1D-8A0A087WSZ0 117 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 BTNL10A8MVZ5 291 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 H7C417 338 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 MANBAO00462 879 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 BPY2O14599 106 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 HCRTO43612 131 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 ALDOBP05062 364 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 BCHEP06276 602 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 PFN1P07737 140 aaKnown RBP-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 CSF3P09919 207 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 GKN3PP0CG01 181 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 P0DMU3 169 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 FAM231AP0DMU4 169 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 FAM231CP0DMU5 169 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 ANXA3P12429 323 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 FOLR1P15328 257 aa-0.35□□□□□ -2.47
AC107958.3-201ENST00000553410 ZNF18P17022 549 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms