RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 EIF4G1Q04637 1599 aaKnown RBP4.59□□□□□ -1.67
SCFD1-208ENST00000553278 TLE4Q04727 773 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 STK38Q15208 465 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 HNRNPA1L2Q32P51 320 aaKnown RBP4.59□□□□□ -1.67
SCFD1-208ENST00000553278 XKR4Q5GH76 650 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 NHLRC3Q5JS37 347 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 METTL11BQ5VVY1 283 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 OR5M10Q6IEU7 315 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 VN1R17PQ8TDU5 208 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 ATP5SQ99766 215 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 ANKRD30BQ9BXX2 1392 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 HEXA-AS1Q9H8Q6 139 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 RHBDD3Q9Y3P4 386 aa4.59□□□□□ -1.67
SCFD1-208ENST00000553278 NSG1A0A0A6YYJ2 146 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 KBTBD11-OT1A0A1B0GTJ5 212 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 DHRS7CA6NNS2 312 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 DCTN6O00399 190 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 CHST1O43916 411 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 SNAI1O95863 264 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-208ENST00000553278 RENP00797 406 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 C2P06681 752 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 HOXD4P09016 255 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-208ENST00000553278 NSG1P42857 185 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 SLC1A1P43005 524 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 CX3CR1P49238 355 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 TMED10P49755 219 aaKnown RBP4.58□□□□□ -1.68
SCFD1-208ENST00000553278 CCNHP51946 323 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-208ENST00000553278 ERVPABLB-1P60509 514 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 IRF8Q02556 426 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 ELAVL2Q12926 359 aaKnown RBP4.58□□□□□ -1.68
SCFD1-208ENST00000553278 LY6G6FQ5SQ64 297 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 REEP3Q6NUK4 255 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 OR9G4Q8NGQ1 327 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 PIBF1Q8WXW3 757 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 NR4A3Q92570 626 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 PSMB7Q99436 277 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 OPRPNQ99935 248 aaPredicted RBP4.58□□□□□ -1.68
SCFD1-208ENST00000553278 GAL3ST1Q99999 423 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 ROGDIQ9GZN7 287 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 UGT1A10Q9HAW8 530 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 DPM3Q9P2X0 92 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 CLN8Q9UBY8 286 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 STAP1Q9ULZ2 295 aa4.58□□□□□ -1.68
SCFD1-208ENST00000553278 BZW2Q9Y6E2 419 aaKnown RBP4.58□□□□□ -1.68
SCFD1-208ENST00000553278 A0A1W2PPV4 95 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 A8MX80 341 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 ZNF879B4DU55 563 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 LOC110117498-PIK3R3F6TDL0 507 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 NDUFAB1O14561 156 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 BCKDKO14874 412 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 POLR3GO15318 223 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-208ENST00000553278 RNF113AO15541 343 aaKnown RBP4.57□□□□□ -1.68
SCFD1-208ENST00000553278 STAMBPO95630 424 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 TGM6O95932 706 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 ALDOBP05062 364 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 PTNP21246 168 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 FOXN2P32314 431 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 KIR2DS2P43631 304 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 GPM6AP51674 278 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 FBXW4P57775 412 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 CD300CQ08708 224 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 CCDC173Q0VFZ6 552 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 SELENBP1Q13228 472 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 HSDL1Q3SXM5 330 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 OR2G6Q5TZ20 316 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 LEMD1Q68G75 181 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 CERS6Q6ZMG9 384 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 DNM1P46Q6ZS02 220 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 ACOT7LQ6ZUV0 252 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 PLA2G4DQ86XP0 818 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 FTMTQ8N4E7 242 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 TRIML2Q8N7C3 387 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 ACOT4Q8N9L9 421 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 FNDC5Q8NAU1 212 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 DRAXINQ8NBI3 349 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-208ENST00000553278 CSNK1G2-AS1Q8NCQ2 148 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 PROKR2Q8NFJ6 384 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 OR9A1PQ8NGU1 263 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 CERS2Q96G23 380 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 PAGE5Q96GU1 130 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 HSFY1Q96LI6 401 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 MCCC1Q96RQ3 725 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-208ENST00000553278 SLC29A1Q99808 456 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 MRPL45Q9BRJ2 306 aaKnown RBP4.57□□□□□ -1.68
SCFD1-208ENST00000553278 MCRIP2Q9BUT9 160 aaKnown RBP4.57□□□□□ -1.68
SCFD1-208ENST00000553278 TMEM59Q9BXS4 323 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 MRPL37Q9BZE1 423 aaKnown RBP4.57□□□□□ -1.68
SCFD1-208ENST00000553278 FBXO44Q9H4M3 255 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 SAMSN1Q9NSI8 373 aaKnown RBP4.57□□□□□ -1.68
SCFD1-208ENST00000553278 OR1A1Q9P1Q5 309 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 ARMCX1Q9P291 453 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 ASIC3Q9UHC3 531 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 MMP24Q9Y5R2 645 aa4.57□□□□□ -1.68
SCFD1-208ENST00000553278 PCSK5Q92824 1860 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 TMEM94Q12767 1356 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 SH3TC1Q8TE82 1336 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 KCNE1BA0A087WTH5 132 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 TRBV9A0A0B4J1U6 114 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 LOC100653049A0A140TA62 436 aa4.56□□□□□ -1.68
SCFD1-208ENST00000553278 PRR23D1E9PI22 279 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms