RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 GORASP2Q9H8Y8 452 aa12.53□□□□□ -0.4
PTCH1-226ENST00000553011 EMC3Q9P0I2 261 aa12.53□□□□□ -0.4
PTCH1-226ENST00000553011 A4GNTQ9UNA3 340 aa12.53□□□□□ -0.4
PTCH1-226ENST00000553011 V9GYQ6 96 aa12.53□□□□□ -0.4
PTCH1-226ENST00000553011 MAST4O15021 2626 aa12.52□□□□□ -0.4
PTCH1-226ENST00000553011 CYSRT1A8MQ03 144 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 J3KTA2 159 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 M0R082 166 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 KPNA4O00629 521 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 GPR171O14626 319 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 FZD7O75084 574 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 POU2F1P14859 743 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 GTF2E2P29084 291 aaKnown RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 TTC33Q6PID6 262 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 TSEN54Q7Z6J9 526 aaKnown RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 GPAT4Q86UL3 456 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 KIF18BQ86Y91 864 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 KDM8Q8N371 416 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 C10orf53Q8N6V4 93 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 OR9K2Q8NGE7 335 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 ZNF417Q8TAU3 575 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 LINC01560Q8TB33 94 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 TMEM255BQ8WV15 326 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 CLPTM1LQ96KA5 538 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 PRRC1Q96M27 445 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 NSMCE2Q96MF7 247 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 ZNF587Q96SQ5 575 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 POLR2J2Q9GZM3 115 aaKnown RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 POLR2J3Q9H1A7 115 aaKnown RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 C1orf21Q9H246 121 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 C6orf203Q9P0P8 240 aaPredicted RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 RHCGQ9UBD6 479 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 PRSS50Q9UI38 385 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 SAMD4AQ9UPU9 718 aaKnown RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 NOSIPQ9Y314 301 aaKnown RBP12.52□□□□□ -0.41
PTCH1-226ENST00000553011 FLVCR1Q9Y5Y0 555 aa12.52□□□□□ -0.41
PTCH1-226ENST00000553011 FFAR1O14842 300 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 PRF1P14222 555 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 ATP6V1B2P21281 511 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 CCKARP32238 428 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 KIR2DL3P43628 341 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 OR3A2P47893 321 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 UGT2B15P54855 530 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 SORDQ00796 357 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 TMEM225Q6GV28 225 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 CYP2R1Q6VVX0 501 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 STK32CQ86UX6 486 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 ZNF100Q8IYN0 542 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 ZNF295-AS1Q8N0V1 137 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 ARHGAP24Q8N264 748 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 SLC7A6OSQ96CW6 309 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-226ENST00000553011 ZNF385AQ96PM9 386 aaKnown RBP12.51□□□□□ -0.41
PTCH1-226ENST00000553011 THTPAQ9BU02 230 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 SF3B5Q9BWJ5 86 aaKnown RBP12.51□□□□□ -0.41
PTCH1-226ENST00000553011 MEPEQ9NQ76 525 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-226ENST00000553011 ELOVL5Q9NYP7 299 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 CRIM1Q9NZV1 1036 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 PRPF19Q9UMS4 504 aaKnown RBP12.51□□□□□ -0.41
PTCH1-226ENST00000553011 ENPP4Q9Y6X5 453 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 CADP27708 2225 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 HRNRQ86YZ3 2850 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-226ENST00000553011 TACC2O95359 2948 aa12.51□□□□□ -0.41
PTCH1-226ENST00000553011 TUBAL3A6NHL2 446 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 hCG_2039718K7EN88 272 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 MRPL33O75394 65 aaKnown RBP12.5□□□□□ -0.41
PTCH1-226ENST00000553011 PRSS23O95084 383 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 VAMP5O95183 116 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 CH25HO95992 272 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 IGHV3-9P01782 118 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 THRBP10828 461 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 UGT2B10P36537 528 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 VLDLRP98155 873 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 MS4A2Q01362 244 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 ST3GAL3Q11203 375 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 MFSD13AQ14CX5 517 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 CASP12Q6UXS9 341 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 STAC2Q6ZMT1 411 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 BEND4Q6ZU67 534 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 H1FNTQ75WM6 255 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-226ENST00000553011 EPHX4Q8IUS5 362 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 OFCC1Q8IZS5 231 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 GABRG1Q8N1C3 465 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 PFN4Q8NHR9 129 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 APH1AQ96BI3 265 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 C7orf34Q96L11 122 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 FNDC11Q9BVV2 318 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 SLC19A3Q9BZV2 496 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 KLHL4Q9C0H6 718 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 MAN2C1Q9NTJ4 1040 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 B3GAT1Q9P2W7 334 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 B3GALT5Q9Y2C3 310 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 CORINQ9Y5Q5 1042 aa12.5□□□□□ -0.41
PTCH1-226ENST00000553011 FBN2P35556 2912 aa12.49□□□□□ -0.41
PTCH1-226ENST00000553011 ENO4A6NNW6 628 aa12.49□□□□□ -0.41
PTCH1-226ENST00000553011 MS4A18H0YCH9 400 aa12.49□□□□□ -0.41
PTCH1-226ENST00000553011 C16orf97H3BN30 126 aa12.49□□□□□ -0.41
PTCH1-226ENST00000553011 GYG2O15488 501 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms