RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	KATNB1	Q9BVA0	655 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ASPN	Q9BXN1	380 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	TIMMDC1	Q9NPL8	285 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	STMN3	Q9NZ72	180 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	WARS2	Q9UGM6	360 aa	Known RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	EXOG	Q9Y2C4	368 aa	Known RBP	11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	ADAM18	Q9Y3Q7	739 aa		11.47	□□□□□ -0.57
CACNB3-223	ENST00000552480	CCDC182	A6NF36	153 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC22A31	A6NKX4	558 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	FAM183A	A6NL82	134 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	SHISA8	B8ZZ34	492 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480		G3V3Y1	287 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	CDK2AP1	O14519	115 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	NOL3	O60936	208 aa	Known RBP	11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	FZD7	O75084	574 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	CBR3	O75828	277 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	PTH	P01270	115 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	LCK	P06239	509 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	FKBP2	P26885	142 aa	Known RBP	11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	DPP4	P27487	766 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	IDUA	P35475	653 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	RRAD	P55042	308 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	CTXN1	P60606	82 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	ERVK-25	P63136	954 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	SELENBP1	Q13228	472 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	EMC4	Q5J8M3	183 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	GPR107	Q5VW38	600 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	TIGD3	Q6B0B8	471 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	FAM122B	Q7Z309	247 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	VASH2	Q86V25	355 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF227	Q86WZ6	799 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR52E2	Q8NGJ4	325 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR4K13	Q8NH42	304 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	THAP4	Q8WY91	577 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	OTULIN	Q96BN8	352 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	ISOC1	Q96CN7	298 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	DOK1	Q99704	481 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	HCAR1	Q9BXC0	346 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	MED20	Q9H944	212 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	KLHL1	Q9NR64	748 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	ANKRD10	Q9NXR5	420 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	MRPL39	Q9NYK5	338 aa	Known RBP	11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	TAS2R5	Q9NYW4	299 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	DKKL1	Q9UK85	242 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	CORIN	Q9Y5Q5	1042 aa		11.46	□□□□□ -0.57
CACNB3-223	ENST00000552480	TEX13C	A0A0J9YWL9	993 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480		M0R082	166 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	PLPP3	O14495	311 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	EFNA2	O43921	213 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	TRMU	O75648	421 aa	Known RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	TFPI	P10646	304 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	ZNF17	P17021	662 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	IL11	P20809	199 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	SLC2A5	P22732	501 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	GTF2E2	P29084	291 aa	Known RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	SDHA	P31040	664 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	DNASE1L1	P49184	302 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	CLK1	P49759	484 aa	Known RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	TMBIM6	P55061	237 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	SOX8	P57073	446 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	OC90	Q02509	493 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	GLYR1	Q49A26	553 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	ATP1A1-AS1	Q5TC04	95 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	SLC6A19	Q695T7	634 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	GPR139	Q6DWJ6	353 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	TUBA3E	Q6PEY2	450 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	B3GNT6	Q6ZMB0	384 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	JAZF1	Q86VZ6	243 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	SCAI	Q8N9R8	606 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	CYB561A3	Q8NBI2	242 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	LSM14A	Q8ND56	463 aa	Known RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	SDR9C7	Q8NEX9	313 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	ZNF417	Q8TAU3	575 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	PTP4A1	Q93096	173 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	KISS1R	Q969F8	398 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	RASD2	Q96D21	266 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	YIPF6	Q96EC8	236 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	DTNBP1	Q96EV8	351 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	ARL5B	Q96KC2	179 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	JSRP1	Q96MG2	331 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	TSPAN32	Q96QS1	320 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	UTP23	Q9BRU9	249 aa	Known RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	MND1	Q9BWT6	205 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	JAM3	Q9BX67	310 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	RACGAP1	Q9H0H5	632 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	INIP	Q9NRY2	104 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	TAS2R16	Q9NYV7	291 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	LRFN1	Q9P244	771 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	ERGIC3	Q9Y282	383 aa		11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480	LSM2	Q9Y333	95 aa	Known RBP	11.45	□□□□□ -0.58
CACNB3-223	ENST00000552480		A0A0G2JMM0	328 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480		A0A1W2PPB8	328 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480		A0A1W2PRS3	328 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	ARGFX	A6NJG6	315 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	LIPT2	A6NK58	231 aa		11.44	□□□□□ -0.58
CACNB3-223	ENST00000552480	KIR3DP1	A8MWS1	328 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms