RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 AIG1Q9NVV5 245 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 P2RX2Q9UBL9 471 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 RASD1Q9Y272 281 aa11.19□□□□□ -0.62
PTCH1-221ENST00000550914 SLC35F4A4IF30 521 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 FRS3O43559 492 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 NPIPB7O75200 414 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 LGI1O95970 557 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 IGLV1-44P01699 117 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 C1QCP02747 245 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 ALDOCP09972 364 aaKnown RBP11.18□□□□□ -0.62
PTCH1-221ENST00000550914 TFPTP0C1Z6 253 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF23P17027 643 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 CDKN2CP42773 168 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 SELENOPP49908 381 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 UFM1P61960 85 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 NAAAQ02083 359 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 SQLEQ14534 574 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 MAPK11Q15759 364 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 ADIPOQQ15848 244 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 COX20Q5RI15 118 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 C1orf140Q5VVS0 124 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 ANKRD16Q6P6B7 361 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 NUP37Q8NFH4 326 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 OR52P1PQ8NH57 321 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 STK35Q8TDR2 534 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 MS4A3Q96HJ5 214 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 FOXN4Q96NZ1 517 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 ZBTB18Q99592 522 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 VRK1Q99986 396 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-221ENST00000550914 C19orf24Q9BVV8 132 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 ARMC7Q9H6L4 198 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 RLIMQ9NVW2 624 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 ADPRHL2Q9NX46 363 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 GPR45Q9Y5Y3 372 aa11.18□□□□□ -0.62
PTCH1-221ENST00000550914 IGHV4-61A0A0C4DH41 118 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 VSTM5A8MXK1 200 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 TMEM229AB2RXF0 380 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 RPL36A-HNRNPH2H7BZ11 118 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 RFXANKO14593 260 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 RGS16O15492 202 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-221ENST00000550914 IGKV3-15P01624 115 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 OR4A8P0C604 315 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 CECR9P0C854 216 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 GKN3PP0CG01 181 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 ZCCHC18P0CG32 403 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 GIFP27352 417 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 IL12AP29459 219 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 IDH3GP51553 393 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-221ENST00000550914 MVDP53602 400 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 CRISP3P54108 245 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 STX3Q13277 289 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 LARS2Q15031 903 aaKnown RBP11.17□□□□□ -0.62
PTCH1-221ENST00000550914 KRT71Q3SY84 523 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 PRAMEF8Q5VWM4 474 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 PRAMEF7Q5VXH5 474 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF836Q6ZNA1 936 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 EPHX4Q8IUS5 362 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 CADM2Q8N3J6 435 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 MREGQ8N565 214 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 MFSD8Q8NHS3 518 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 SLC35B4Q969S0 331 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 ALKBH3Q96Q83 286 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-221ENST00000550914 RAB1BQ9H0U4 201 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF442Q9H7R0 627 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 THUMPD1Q9NXG2 353 aaKnown RBP11.17□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF232Q9UNY5 417 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 RCE1Q9Y256 329 aa11.17□□□□□ -0.62
PTCH1-221ENST00000550914 SDHDO14521 159 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 FZD7O75084 574 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 TGFAP01135 160 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 IL6P05231 212 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 GSNP06396 782 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 ERCC1P07992 297 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-221ENST00000550914 BGNP21810 368 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 NME5P56597 212 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 BNIP2Q12982 314 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 IQCCQ4KMZ1 466 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 WDR93Q6P2C0 686 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 NIPAL3Q6P499 406 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 LINGO2Q7L985 606 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 VRK2Q86Y07 508 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 CCDC36Q8IYA8 594 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 ANKS4BQ8N8V4 417 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 IL17RDQ8NFM7 739 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 PNPT1Q8TCS8 783 aaKnown RBP11.16□□□□□ -0.62
PTCH1-221ENST00000550914 NEU4Q8WWR8 484 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-221ENST00000550914 HPS1Q92902 700 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 C3orf49Q96BT1 292 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 ANKRD27Q96NW4 1050 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 SPATA9Q9BWV2 254 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 BPESC1Q9GZL8 116 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 NELFAQ9H3P2 528 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 CACYBPQ9HB71 228 aaKnown RBP11.16□□□□□ -0.62
PTCH1-221ENST00000550914 PNPOQ9NVS9 261 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 ZNF443Q9Y2A4 671 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-221ENST00000550914 IFT52Q9Y366 437 aa11.16□□□□□ -0.62
PTCH1-221ENST00000550914 A0A0G2JPF8 293 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 TRPC5OSA6NMA1 111 aa11.15□□□□□ -0.62
PTCH1-221ENST00000550914 HNRNPCL2B2RXH8 293 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms