RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 WBP2NLQ6ICG8 309 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 ANKK1Q8NFD2 765 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 OR1K1Q8NGR3 316 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 AURKBQ96GD4 344 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-218ENST00000548945 PRR14Q9BWN1 585 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 TAPBPLQ9BX59 468 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 C20orf27Q9GZN8 174 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 KCNK9Q9NPC2 374 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 CA10Q9NS85 328 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 NKIRAS1Q9NYS0 192 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 CALML5Q9NZT1 146 aa11.2□□□□□ -0.62
PTCH1-218ENST00000548945 LOC100289279A0A1B0GTE1 492 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 WDR91A4D1P6 747 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 KLF11O14901 512 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 KRT33AO76009 404 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 APEHP13798 732 aaKnown RBP11.19□□□□□ -0.62
PTCH1-218ENST00000548945 CDH2P19022 906 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-218ENST00000548945 ACAA2P42765 397 aaKnown RBP11.19□□□□□ -0.62
PTCH1-218ENST00000548945 PPOXP50336 477 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 UBE2NP61088 152 aaKnown RBP11.19□□□□□ -0.62
PTCH1-218ENST00000548945 COPZ1P61923 177 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 LIN52Q52LA3 116 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 FAM120AOSQ5T036 256 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 RNF220Q5VTB9 566 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 ZNF621Q6ZSS3 439 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 CREB3L2Q70SY1 520 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 SLC46A3Q7Z3Q1 461 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 SPATA19Q7Z5L4 167 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 GPAT4Q86UL3 456 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 ARIH2OSQ8N7S6 290 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 GLB1L3Q8NCI6 653 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-218ENST00000548945 OR4F15Q8NGB8 312 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 BCL2L2Q92843 193 aaPredicted RBP11.19□□□□□ -0.62
PTCH1-218ENST00000548945 MSI2Q96DH6 328 aaKnown RBP11.19□□□□□ -0.62
PTCH1-218ENST00000548945 TEX37Q96LM6 180 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 OR52E6Q96RD3 313 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 NUF2Q9BZD4 464 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 LINC00470Q9BZP3 86 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 PLK3Q9H4B4 646 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 AIG1Q9NVV5 245 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 P2RX2Q9UBL9 471 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 RASD1Q9Y272 281 aa11.19□□□□□ -0.62
PTCH1-218ENST00000548945 SLC35F4A4IF30 521 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 FRS3O43559 492 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 NPIPB7O75200 414 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 LGI1O95970 557 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 IGLV1-44P01699 117 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 C1QCP02747 245 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 ALDOCP09972 364 aaKnown RBP11.18□□□□□ -0.62
PTCH1-218ENST00000548945 TFPTP0C1Z6 253 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 ZNF23P17027 643 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 CDKN2CP42773 168 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 SELENOPP49908 381 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 GYS2P54840 703 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 UFM1P61960 85 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 NAAAQ02083 359 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 SQLEQ14534 574 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 MAPK11Q15759 364 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 ADIPOQQ15848 244 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 COX20Q5RI15 118 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 C1orf140Q5VVS0 124 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 ANKRD16Q6P6B7 361 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 NUP37Q8NFH4 326 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 OR52P1PQ8NH57 321 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 STK35Q8TDR2 534 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 FOXN4Q96NZ1 517 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 ZBTB18Q99592 522 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 VRK1Q99986 396 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-218ENST00000548945 C19orf24Q9BVV8 132 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 ARMC7Q9H6L4 198 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 INTS9Q9NV88 658 aaKnown RBP11.18□□□□□ -0.62
PTCH1-218ENST00000548945 RLIMQ9NVW2 624 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 ADPRHL2Q9NX46 363 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 GPR45Q9Y5Y3 372 aa11.18□□□□□ -0.62
PTCH1-218ENST00000548945 IGHV4-61A0A0C4DH41 118 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 VSTM5A8MXK1 200 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 TMEM229AB2RXF0 380 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 RPL36A-HNRNPH2H7BZ11 118 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 RFXANKO14593 260 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 IGKV3-15P01624 115 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 OR4A8P0C604 315 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 CECR9P0C854 216 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 GKN3PP0CG01 181 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 ZCCHC18P0CG32 403 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 GIFP27352 417 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 IL12AP29459 219 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 MDH1P40925 334 aaKnown RBP11.17□□□□□ -0.62
PTCH1-218ENST00000548945 IDH3GP51553 393 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-218ENST00000548945 MVDP53602 400 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 CRISP3P54108 245 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 CBX1P83916 185 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 STX3Q13277 289 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 LARS2Q15031 903 aaKnown RBP11.17□□□□□ -0.62
PTCH1-218ENST00000548945 PRAMEF8Q5VWM4 474 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 PRAMEF7Q5VXH5 474 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 ZNF836Q6ZNA1 936 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 EPHX4Q8IUS5 362 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 CADM2Q8N3J6 435 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 ANKRD42Q8N9B4 389 aa11.17□□□□□ -0.62
PTCH1-218ENST00000548945 MFSD8Q8NHS3 518 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms