RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 MEOX1P50221 254 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 ACER2Q5QJU3 275 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 HLA-DQA1Q5Y7H0 255 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 RPL13AP3Q6NVV1 102 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 TUBA3EQ6PEY2 450 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 ULK3Q6PHR2 472 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 FGD2Q7Z6J4 655 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 CDK20Q8IZL9 346 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 BEST3Q8N1M1 668 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 SLC43A2Q8N370 569 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 ZNF614Q8N883 585 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 FAM98AQ8NCA5 519 aaKnown RBP18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 OR4C3Q8NH37 302 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 TP53INP1Q96A56 240 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 TEX12Q9BXU0 123 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 MED17Q9NVC6 651 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 FLRT3Q9NZU0 649 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 MED31Q9Y3C7 131 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 CDH10Q9Y6N8 788 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 A0A1B0GWA3 101 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 A0A1W2PQD3 144 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 AHCYL1O43865 530 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 CTAG2O75638 210 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 GP2P55259 537 aaKnown RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 LSAMPQ13449 338 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 IRF3Q14653 427 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 OR1C1Q15619 314 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 GPR107Q5VW38 600 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 ACSM5Q6NUN0 579 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 H3F3CQ6NXT2 135 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 TMEM205Q6UW68 189 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 WDR88Q6ZMY6 472 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 ZNF620Q6ZNG0 422 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 ANKRD37Q7Z713 158 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 C9orf40Q8IXQ3 194 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 AMER2Q8N7J2 671 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 RAB2BQ8WUD1 216 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 DNAJA4Q8WW22 397 aaPredicted RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 C12orf43Q96C57 262 aaKnown RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 ARSGQ96EG1 525 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 SLC38A2Q96QD8 506 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 UTP23Q9BRU9 249 aaKnown RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 CDCA4Q9BXL8 241 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 WWTR1Q9GZV5 400 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 CNIH4Q9P003 139 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 EXPH5Q8NEV8 1989 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 FN1P02751 2386 aaKnown RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 VGLL3A8MV65 326 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 TSPAN2O60636 221 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 NOL3O60936 208 aaKnown RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 CD96P40200 585 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 PNLIPRP2P54317 469 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 NNATQ16517 81 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 TMEM44Q2T9K0 475 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 RNLSQ5VYX0 342 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 CXXC5Q7LFL8 322 aaKnown RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 NFAM1Q8NET5 270 aaPredicted RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 B3GNT7Q8NFL0 401 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 OR8D4Q8NGM9 314 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 FAM57AQ8TBR7 257 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 C18orf12Q96KH6 178 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 RHNO1Q9BSD3 238 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 PLA2G12AQ9BZM1 189 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 TVP23BQ9NYZ1 205 aa18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 RPL36Q9Y3U8 105 aaKnown RBP18.04■□□□□ 0.48
CTDSP2-204ENST00000548823 UNC119BA6NIH7 251 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 SAGE2PA6NJ88 616 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 SCDO00767 359 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 PIP5K1CO60331 668 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 ENTPD6O75354 484 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 INMTO95050 263 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 UTS2O95399 124 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 IGF2P01344 180 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 HMGN1P05114 100 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 PAX7P23759 505 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 SPINK14Q6IE38 97 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 GALNTL5Q7Z4T8 443 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 ANKRD13BQ86YJ7 626 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 STX19Q8N4C7 294 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 TCEANCQ8N8B7 351 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 TMEM163Q8TC26 289 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 METTL21AQ8WXB1 218 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 RND1Q92730 232 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 EFHD2Q96C19 240 aaPredicted RBP18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 MBD6Q96DN6 1003 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 DSN1Q9H410 356 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 EGLN3Q9H6Z9 239 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 MRPS18AQ9NVS2 196 aaKnown RBP18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 RPS6KB2Q9UBS0 482 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 ICAM5Q9UMF0 924 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 PLEKHA6Q9Y2H5 1048 aa18.03■□□□□ 0.48
CTDSP2-204ENST00000548823 IRGMA1A4Y4 181 aa18.02■□□□□ 0.47
CTDSP2-204ENST00000548823 SNTNA6NMZ2 147 aa18.02■□□□□ 0.47
CTDSP2-204ENST00000548823 H3BMQ9 156 aa18.02■□□□□ 0.47
CTDSP2-204ENST00000548823 M0R129 80 aa18.02■□□□□ 0.47
CTDSP2-204ENST00000548823 ADAM11O75078 769 aa18.02■□□□□ 0.47
CTDSP2-204ENST00000548823 RCBTB2O95199 551 aa18.02■□□□□ 0.47
CTDSP2-204ENST00000548823 IFI30P13284 250 aa18.02■□□□□ 0.47
CTDSP2-204ENST00000548823 HPGDP15428 266 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms