RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ATP23Q9Y6H3 246 aa5.89□□□□□ -1.47
SCAF11-211ENST00000547950 USH1CQ9Y6N9 552 aa5.89□□□□□ -1.47
SCAF11-211ENST00000547950 PCNX3Q9H6A9 2034 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 FAM234BA2RU67 622 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 A8MVM7 634 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 C5orf58C9J3I9 102 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 FRS3O43559 492 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 TP53P04637 393 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-211ENST00000547950 ITGA5P08648 1049 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 MPGP29372 298 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 TTKP33981 857 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 IDH3AP50213 366 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 PRPS1P60891 318 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 STX1BP61266 288 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 LGALS3BPQ08380 585 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 RAB35Q15286 201 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 RGNQ15493 299 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 ETFDHQ16134 617 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 CREB3L2Q70SY1 520 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 SERPINA11Q86U17 422 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 PRIMA1Q86XR5 153 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 FBXL14Q8N1E6 418 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 KDM8Q8N371 416 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 OR9K2Q8NGE7 335 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 LRRC8CQ8TDW0 803 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 HTRA1Q92743 480 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 GTF2H4Q92759 462 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 ADAD1Q96M93 576 aaKnown RBP5.88□□□□□ -1.47
SCAF11-211ENST00000547950 ZNF385AQ96PM9 386 aaKnown RBP5.88□□□□□ -1.47
SCAF11-211ENST00000547950 DHRS9Q9BPW9 319 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 SPATA9Q9BWV2 254 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 CACNG6Q9BXT2 260 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 PAIP1Q9H074 479 aaKnown RBP5.88□□□□□ -1.47
SCAF11-211ENST00000547950 BARX1Q9HBU1 254 aaPredicted RBP5.88□□□□□ -1.47
SCAF11-211ENST00000547950 SLCO1B3Q9NPD5 702 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 TMEM45AQ9NWC5 275 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 THUMPD1Q9NXG2 353 aaKnown RBP5.88□□□□□ -1.47
SCAF11-211ENST00000547950 CCDC167Q9P0B6 97 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 SLAMF8Q9P0V8 285 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 MALT1Q9UDY8 824 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 MGAT4BQ9UQ53 548 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 IFT52Q9Y366 437 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 CHST2Q9Y4C5 530 aa5.88□□□□□ -1.47
SCAF11-211ENST00000547950 A0A096LPE4 126 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 A0A1W2PPZ6 126 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 AQP7P3A6NL99 342 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 KIAA1324LA8MWY0 1029 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-211ENST00000547950 PDLIM1O00151 329 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 NR5A2O00482 541 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 POLR3GO15318 223 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-211ENST00000547950 AHSA1O95433 338 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 LGI1O95970 557 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 CBLP22681 906 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 RPS5P46782 204 aaKnown RBP5.87□□□□□ -1.47
SCAF11-211ENST00000547950 SELENOPP49908 381 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 NUDT6P53370 316 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 AQP5P55064 265 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 IRX1P78414 480 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-211ENST00000547950 SLC25A3Q00325 362 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 IL1RL1Q01638 556 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 ZSWIM7Q19AV6 140 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 HIKESHIQ53FT3 197 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 AGKQ53H12 422 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 RNF220Q5VTB9 566 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 C1orf140Q5VVS0 124 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 PRAMEF8Q5VWM4 474 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 PRAMEF7Q5VXH5 474 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 NIPAL3Q6P499 406 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 KLHL24Q6TFL4 600 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 B3GLCTQ6Y288 498 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 MSANTD1Q6ZTZ1 278 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 DTX2Q86UW9 622 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 ALDH16A1Q8IZ83 802 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 MUC15Q8N387 334 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 POMGNT2Q8NAT1 580 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 NFKBIDQ8NI38 313 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 TMEM45BQ96B21 275 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 C3orf49Q96BT1 292 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 SPDL1Q96EA4 605 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 KTI12Q96EK9 354 aaPredicted RBP5.87□□□□□ -1.47
SCAF11-211ENST00000547950 EBF4Q9BQW3 602 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 RHNO1Q9BSD3 238 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 SF3B5Q9BWJ5 86 aaKnown RBP5.87□□□□□ -1.47
SCAF11-211ENST00000547950 RAD21L1Q9H4I0 556 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 FKRPQ9H9S5 495 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 A4GALTQ9NPC4 353 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 TCF7L2Q9NQB0 619 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 SLC17A5Q9NRA2 495 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 YAE1D1Q9NRH1 226 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 TPSG1Q9NRR2 321 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 CBLN4Q9NTU7 201 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 RPS6KB2Q9UBS0 482 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 DCTN4Q9UJW0 460 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 MOKQ9UQ07 419 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 AMDHD2Q9Y303 409 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 DSPPQ9NZW4 1301 aa5.87□□□□□ -1.47
SCAF11-211ENST00000547950 IGHV4-30-2A0A087WSY4 118 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 A0A096LPI6 279 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 SCO2A0A1W2PP80 73 aa5.86□□□□□ -1.47
SCAF11-211ENST00000547950 ZNF587BE7ETH6 402 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms