RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ATF4P18848 351 aaPredicted RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 C5AR1P21730 350 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 VIPR2P41587 438 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 ACAA2P42765 397 aaKnown RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 GPR143P51810 404 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 ART1P52961 327 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 HCCSP53701 268 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 RPS21P63220 83 aaKnown RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 DBPQ10586 325 aaPredicted RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 COL9A2Q14055 689 aaPredicted RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 FGL2Q14314 439 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 KIR2DS3Q14952 304 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 PDGFRLQ15198 375 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 PRICKLE4Q2TBC4 344 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 DEFB134Q4QY38 66 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 ALG10BQ5I7T1 473 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 ULK3Q6PHR2 472 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 ZC3H14Q6PJT7 736 aaKnown RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 OR4N5Q8IXE1 308 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 EIF4E3Q8N5X7 224 aaKnown RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 CAMKVQ8NCB2 501 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 ZCCHC10Q8TBK6 192 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 RSC1A1Q92681 617 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 ZNF707Q96C28 371 aaPredicted RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 OR2A5Q96R48 311 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 TWSG1Q9GZX9 223 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 SLC25A18Q9H1K4 315 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 DNAJB12Q9NXW2 375 aaKnown RBP8.03□□□□□ -1.12
TDP1-204ENST00000545686 KLK11Q9UBX7 282 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 OR5V1Q9UGF6 321 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 COPS3Q9UNS2 423 aa8.03□□□□□ -1.12
TDP1-204ENST00000545686 HEATR5AQ86XA9 2040 aa8.02□□□□□ -1.12
TDP1-204ENST00000545686 LRRC72A6NJI9 287 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 MAGEB4O15481 346 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 CTNSO60931 367 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 AQP8O94778 261 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 GPR75O95800 540 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 CSF2RAP15509 400 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 SPI1P17947 270 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 TAS2R20P59543 309 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 HLXQ14774 488 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 RBMS2Q15434 407 aaKnown RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 MPPED2Q15777 294 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 ZNF684Q5T5D7 378 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 OR5M10Q6IEU7 315 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 FIGNL1Q6PIW4 674 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 ZNF550Q7Z398 422 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 HSD17B13Q7Z5P4 300 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 NPEPL1Q8NDH3 523 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 PIGKQ92643 395 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 GCDHQ92947 438 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 CTHRC1Q96CG8 243 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 SGTBQ96EQ0 304 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 HSPA12BQ96MM6 686 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 LINC00052Q96N35 136 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 SMAD5Q99717 465 aaKnown RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 IL21RQ9HBE5 538 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 MKKSQ9NPJ1 570 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 C12orf4Q9NQ89 552 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 TAS2R8Q9NYW2 309 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 MED11Q9P086 117 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 SCML1Q9UN30 329 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 PCDHGA5Q9Y5G8 931 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 IER3IP1Q9Y5U9 82 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 ACOD1A6NK06 481 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 MCIDASD6RGH6 385 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 P2RX6O15547 441 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 SELENOFO60613 162 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 LDB3O75112 727 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 TSPAN9O75954 239 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 GLCEO94923 617 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 GLSO94925 669 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 PAK4O96013 591 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 EGFP01133 1207 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 FGF2P09038 288 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 TACSTD2P09758 323 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 ANXA7P20073 488 aaKnown RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 SDHBP21912 280 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 CDK2P24941 298 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 AK4P27144 223 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 CFPP27918 469 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 GABRA3P34903 492 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 MGAT2Q10469 447 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 SGCGQ13326 291 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 CBFBQ13951 182 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 GK2Q14410 553 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 Q499Y3 187 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 FBXO42Q6P3S6 717 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 ARSKQ6UWY0 536 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 TFAP2EQ6VUC0 442 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 ZNF433Q8N7K0 673 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 OR4E2Q8NGC2 313 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 OR6M1Q8NGM8 313 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 FLVCR1-AS1Q8TAF5 88 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 ST8SIA4Q92187 359 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 RGP1Q92546 391 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 GPX7Q96SL4 187 aaPredicted RBP8.02□□□□□ -1.13
TDP1-204ENST00000545686 LDAHQ9H6V9 325 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 C2orf42Q9NWW7 574 aa8.02□□□□□ -1.13
TDP1-204ENST00000545686 COQ3Q9NZJ6 369 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms