RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SNAI3Q3KNW1 292 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 SFT2D3Q587I9 215 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF506Q5JVG8 444 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 PDZK1Q5T2W1 519 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 LGSNQ5TDP6 509 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 LEMD1Q68G75 181 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 OR8G2PQ6IF36 304 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 CCBE1Q6UXH8 406 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 APTXQ7Z2E3 356 aaKnown RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 MOB3BQ86TA1 216 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ABHD12Q8N2K0 398 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ARL14Q8N4G2 192 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 BEST4Q8NFU0 473 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 OR51G2Q8NGK0 314 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 AENQ8WTP8 325 aaKnown RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 SCFD1Q8WVM8 642 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 TPD52L3Q96J77 140 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 C9orf85Q96MD7 179 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 HCAR1Q9BXC0 346 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ROPN1BQ9BZX4 212 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 CHMP4BQ9H444 224 aaKnown RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 SGK2Q9HBY8 427 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ADAM28Q9UKQ2 775 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 RASD1Q9Y272 281 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 PIGLQ9Y2B2 252 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 OARD1Q9Y530 152 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ALG6Q9Y672 507 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 MAD1L1Q9Y6D9 718 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 SPAG17Q6Q759 2223 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 OTOGLQ3ZCN5 2332 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 WDR19Q8NEZ3 1342 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 CNOT1A5YKK6 2376 aaKnown RBP3.22□□□□□ -1.89
SNHG1-222ENST00000545308 SPTBN2O15020 2390 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 KIAA1671Q9BY89 1806 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 A0A1B0GTH9 108 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 FAM240BA0A1B0GVZ2 78 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 FCN1O00602 326 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 MED7O43513 233 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 PI15O43692 258 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 KLHL41O60662 606 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 RHBDL1O75783 438 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 LRATO95237 230 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 RENP00797 406 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 RETP07949 1114 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 ACVR1BP36896 505 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 ALDH3B2P48448 385 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 ERVK11-1P61568 191 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 OTUD4Q01804 1114 aaKnown RBP3.22□□□□□ -1.89
SNHG1-222ENST00000545308 ELAVL2Q12926 359 aaKnown RBP3.22□□□□□ -1.89
SNHG1-222ENST00000545308 MESDQ14696 234 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 NDUFA9Q16795 377 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 SLC25A52Q3SY17 297 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 NHLRC3Q5JS37 347 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 FAM182AQ5T1J6 154 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 ZC2HC1BQ5TFG8 222 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 FAHD2BQ6P2I3 314 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-222ENST00000545308 DOK6Q6PKX4 331 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 GCNT7Q6ZNI0 430 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 TRPM8Q7Z2W7 1104 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 TIPARPQ7Z3E1 657 aaKnown RBP3.22□□□□□ -1.89
SNHG1-222ENST00000545308 DHDDSQ86SQ9 333 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 FAM228AQ86W67 206 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 LRRC49Q8IUZ0 686 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 Q8N377 158 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 C15orf54Q8N8G6 183 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 MFSD9Q8NBP5 474 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 VN1R2Q8NFZ6 395 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 OR10A7Q8NGE5 316 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 FAHD2AQ96GK7 314 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 LINC00479Q96M42 142 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 SLC38A2Q96QD8 506 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 MTMR9Q96QG7 549 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 MCRIP2Q9BUT9 160 aaKnown RBP3.22□□□□□ -1.89
SNHG1-222ENST00000545308 LRRC61Q9BV99 259 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 ADNPQ9H2P0 1102 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 MCCC2Q9HCC0 563 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 EXOSC3Q9NQT5 275 aaKnown RBP3.22□□□□□ -1.89
SNHG1-222ENST00000545308 ETNK2Q9NVF9 386 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 EHFQ9NZC4 300 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 WRAP73Q9P2S5 460 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-222ENST00000545308 PRODH2Q9UF12 536 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 SCML2Q9UQR0 700 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 DNAH14Q0VDD8 3507 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 GREB1Q4ZG55 1949 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 NBEAQ8NFP9 2946 aa3.22□□□□□ -1.89
SNHG1-222ENST00000545308 ABCB11O95342 1321 aa3.21□□□□□ -1.89
SNHG1-222ENST00000545308 LCTP09848 1927 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 NCOR2Q9Y618 2525 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 IGKV6D-41A0A0C4DH26 115 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 A0A1B0GVL5 298 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 GOLGA8OA6NCC3 632 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 CCT8L1PA6NM43 557 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 ZNF487B1APH4 448 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 GOLGA8NF8WBI6 632 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 SAP18O00422 153 aaKnown RBP3.21□□□□□ -1.9
SNHG1-222ENST00000545308 LRRTM2O43300 516 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 N4BP1O75113 896 aaKnown RBP3.21□□□□□ -1.9
SNHG1-222ENST00000545308 SCGNO76038 276 aa3.21□□□□□ -1.9
SNHG1-222ENST00000545308 TSPAN12O95859 305 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms