RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 KLHL17Q6TDP4 642 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 ZNF704Q6ZNC4 412 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 CCDC80Q76M96 950 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 AAED1Q7RTV5 226 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 SNX32Q86XE0 403 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 LRRC75A-AS1Q8N1F1 130 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 TMEM99Q8N816 258 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 ADPRHL1Q8NDY3 354 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 RP9Q8TA86 221 aaKnown RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 RADILQ96JH8 1075 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 ZNF317Q96PQ6 595 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 CCL19Q99731 98 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 ARHGDIGQ99819 225 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 TMEM204Q9BSN7 226 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 TMEM43Q9BTV4 400 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 POLR2J2Q9GZM3 115 aaKnown RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 NSRP1Q9H0G5 558 aaKnown RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 POLR2J3Q9H1A7 115 aaKnown RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 UBTD1Q9HAC8 227 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 MOV10Q9HCE1 1003 aaKnown RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 BAG5Q9UL15 447 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 RNF115Q9Y4L5 304 aa10.43□□□□□ -0.74
HDAC4-216ENST00000544989 MAGED1Q9Y5V3 778 aaPredicted RBP10.43□□□□□ -0.74
HDAC4-216ENST00000544989 LOC102725191A0A1B0GVB3 256 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 FTCDNL1E5RQL4 147 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 NDUFAB1O14561 156 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 HS3ST1O14792 307 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 SMPD2O60906 423 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 KRT33AO76009 404 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 ZNF43P17038 809 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 HTR2AP28223 471 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 LOXP28300 417 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-216ENST00000544989 MPGP29372 298 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 RPS5P46782 204 aaKnown RBP10.42□□□□□ -0.74
HDAC4-216ENST00000544989 FAPQ12884 760 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 SELPLGQ14242 412 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 NRF1Q16656 503 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 NCMAPQ5T1S8 102 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 SHEQ5VZ18 495 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 C22orf34Q6ZV56 151 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 H1FNTQ75WM6 255 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-216ENST00000544989 SCAIQ8N9R8 606 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 SMYD1Q8NB12 490 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 RNF217Q8TC41 542 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 C10orf82Q8WW14 230 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 PROX1Q92786 737 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 SLC25A36Q96CQ1 311 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 DNAJA3Q96EY1 480 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 OXGR1Q96P68 337 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 MCHR1Q99705 422 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 ASPNQ9BXN1 380 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 SLCO5A1Q9H2Y9 848 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 CXorf56Q9H5V9 222 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 MGAT4BQ9UQ53 548 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 RCE1Q9Y256 329 aa10.42□□□□□ -0.74
HDAC4-216ENST00000544989 LOC100653049A0A140TA62 436 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 A0A1W2PPR1 153 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 ZNF587BE7ETH6 402 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 PDLIM1O00151 329 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 FXYD1O00168 92 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 CHP2O43745 196 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 RAMP1O60894 148 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 KRT34O76011 436 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 WNT11O96014 354 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 MT-ATP6P00846 226 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 CD247P20963 164 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 GZMMP51124 257 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 P2RY4P51582 365 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 SH3BGRP55822 239 aaPredicted RBP10.41□□□□□ -0.74
HDAC4-216ENST00000544989 EGR4Q05215 589 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 C1DQ13901 141 aaKnown RBP10.41□□□□□ -0.74
HDAC4-216ENST00000544989 DUSP7Q16829 419 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 GLIPR1L2Q4G1C9 344 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 KLHL24Q6TFL4 600 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 TMEM108Q6UXF1 575 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 CREB3L2Q70SY1 520 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 CALHM3Q86XJ0 350 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 TGIF2LYQ8IUE0 185 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 ZNF611Q8N823 705 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 ZIC4Q8N9L1 334 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 KTI12Q96EK9 354 aaPredicted RBP10.41□□□□□ -0.74
HDAC4-216ENST00000544989 BOD1Q96IK1 185 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 MPP4Q96JB8 637 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 MUS81Q96NY9 551 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 HS3ST6Q96QI5 342 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 PTDSS2Q9BVG9 487 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 LINC00470Q9BZP3 86 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 SLC19A3Q9BZV2 496 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 AMBRA1Q9C0C7 1298 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 PCDHAC1Q9H158 963 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 OBP2BQ9NPH6 170 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 AMDHD2Q9Y303 409 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 ROS1P08922 2347 aa10.41□□□□□ -0.74
HDAC4-216ENST00000544989 NSD1Q96L73 2696 aaPredicted RBP10.41□□□□□ -0.74
HDAC4-216ENST00000544989 TRAPPC13A5PLN9 417 aa10.4□□□□□ -0.74
HDAC4-216ENST00000544989 FAM220BPB1ANY3 271 aa10.4□□□□□ -0.74
HDAC4-216ENST00000544989 RAD51DO75771 328 aa10.4□□□□□ -0.74
HDAC4-216ENST00000544989 IGHV3-9P01782 118 aa10.4□□□□□ -0.74
HDAC4-216ENST00000544989 EDNRAP25101 427 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms