RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545		G3V2T6	193 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	PYCARD-AS1	I3L0S3	204 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	SMAD9	O15198	467 aa	Known RBP	9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	LRRTM2	O43300	516 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	SERPINI2	O75830	405 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	AQP8	O94778	261 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	GAST	P01350	101 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	IL2RA	P01589	272 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	STS	P08842	583 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	ADORA3	P0DMS8	318 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	GLI4	P10075	376 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	KLK2	P20151	261 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	PRKACG	P22612	351 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	LIMS1	P48059	325 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	RASGEF1B	Q0VAM2	473 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	TAF11	Q15544	211 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	RTL6	Q6ICC9	239 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	HMBOX1	Q6NT76	420 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	PGBD2	Q6P3X8	592 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	SHQ1	Q6PI26	577 aa	Known RBP	9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	PAQR6	Q6TCH4	344 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZER1	Q7Z7L7	766 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	TMEM179B	Q7Z7N9	219 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	OAF	Q86UD1	273 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	GPAT4	Q86UL3	456 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	STK32C	Q86UX6	486 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	FJX1	Q86VR8	437 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	HIPK1	Q86Z02	1210 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZDHHC13	Q8IUH4	622 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	HS3ST5	Q8IZT8	346 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	PQLC1	Q8N2U9	271 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	SLC43A2	Q8N370	569 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	KDM8	Q8N371	416 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	RPRML	Q8N4K4	120 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	ATG16L2	Q8NAA4	619 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	C9orf106	Q8NAJ2	232 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	OR5J2	Q8NH18	312 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	OR51A7	Q8NH64	312 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	ABHD3	Q8WU67	409 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	GTPBP3	Q969Y2	492 aa	Known RBP	9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF775	Q96BV0	537 aa	Predicted RBP	9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	INTS12	Q96CB8	462 aa	Known RBP	9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	TM9SF2	Q99805	663 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	VKORC1	Q9BQB6	163 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	TTYH2	Q9BSA4	534 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	FUZ	Q9BT04	418 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF556	Q9HAH1	456 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	NTN4	Q9HB63	628 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	MRPL39	Q9NYK5	338 aa	Known RBP	9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	KIF17	Q9P2E2	1029 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	KLHL9	Q9P2J3	617 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	SEC14L4	Q9UDX3	406 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	CLEC4A	Q9UMR7	237 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	RASD1	Q9Y272	281 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	B3GALT5	Q9Y2C3	310 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	MEMO1	Q9Y316	297 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	FAM215A	Q9Y5M1	114 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	IGSF10	Q6WRI0	2623 aa		9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	RP1L1	Q8IWN7	2480 aa	Predicted RBP	9.08	□□□□□ -0.96
CPSF7-221	ENST00000543545	FAM208B	Q5VWN6	2430 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF407	Q9C0G0	2248 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	TRAV27	A0A087WT01	109 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	KDM4E	B2RXH2	506 aa	Predicted RBP	9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF814	B7Z6K7	855 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	C11orf98	E9PRG8	122 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	PLPP3	O14495	311 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	RNF13	O43567	381 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	CYTIP	O60759	359 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	VAMP5	O95183	116 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	IGF2	P01344	180 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	ANXA8	P13928	327 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	ZNF43	P17038	809 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	RPL4	P36578	427 aa	Known RBP	9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	AQP2	P41181	271 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	OMP	P47874	163 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	SLC9A3	P48764	834 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	SIRPA	P78324	504 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	RNPS1	Q15287	305 aa	Known RBP	9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	TMEM201	Q5SNT2	666 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	OR2A2	Q6IF42	318 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	C1orf94	Q6P1W5	598 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	TMPRSS11F	Q6ZWK6	438 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	SLC46A3	Q7Z3Q1	461 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	UEVLD	Q8IX04	471 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	GCNT2	Q8N0V5	402 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	SVOPL	Q8N434	492 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	CNEP1R1	Q8N9A8	125 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	SCAI	Q8N9R8	606 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	OR13C2	Q8NGS9	318 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	RND1	Q92730	232 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	NRBF2	Q96F24	287 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	TNFRSF13C	Q96RJ3	184 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	FEV	Q99581	238 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	NDEL1	Q9GZM8	345 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	EMC3	Q9P0I2	261 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	CLCF1	Q9UBD9	225 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	MGAT4B	Q9UQ53	548 aa		9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	RRP15	Q9Y3B9	282 aa	Known RBP	9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	MAGED1	Q9Y5V3	778 aa	Predicted RBP	9.07	□□□□□ -0.96
CPSF7-221	ENST00000543545	HEATR5A	Q86XA9	2040 aa		9.07	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms