RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PPIL3Q9H2H8 161 aaKnown RBP12.87□□□□□ -0.35
LDB3-207ENST00000542786 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
LDB3-207ENST00000542786 TRAV36DV7A0A075B6V5 113 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 SMIM30A4D0T7 59 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 OGG1O15527 345 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 SCO2O43819 266 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 OR2T7P0C7T2 308 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 SDHAP31040 664 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 CAPZA2P47755 286 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 P2RX1P51575 399 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 EMP2P54851 167 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 DLX5P56178 289 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 CAV3P56539 151 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 TAS2R43P59537 309 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 LGALS3BPQ08380 585 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 QPRTQ15274 297 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 GLYR1Q49A26 553 aaPredicted RBP12.86□□□□□ -0.35
LDB3-207ENST00000542786 ALG10Q5BKT4 473 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 SLC23A3Q6PIS1 610 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 PAPD4Q6PIY7 484 aaKnown RBP12.86□□□□□ -0.35
LDB3-207ENST00000542786 LYPD4Q6UWN0 246 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 LYPD8Q6UX82 237 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 NR2C2APQ86WQ0 139 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 ADGRG3Q86Y34 549 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 SLC35F2Q8IXU6 374 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 SYS1Q8N2H4 156 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 LSM14AQ8ND56 463 aaKnown RBP12.86□□□□□ -0.35
LDB3-207ENST00000542786 OR2T27Q8NH04 317 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 RPS4Y2Q8TD47 263 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
LDB3-207ENST00000542786 SYNDIG1Q9H7V2 258 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 AKIRIN1Q9H9L7 192 aaPredicted RBP12.86□□□□□ -0.35
LDB3-207ENST00000542786 ABCB9Q9NP78 766 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 RHBDL2Q9NX52 303 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 COPS3Q9UNS2 423 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 HRH3Q9Y5N1 445 aa12.86□□□□□ -0.35
LDB3-207ENST00000542786 PRR32B1ATL7 298 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 BLOC1S5-TXNDC5H3BN57 136 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 J3QLW9 94 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 KHNYNO15037 678 aaKnown RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 GDF9O60383 454 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 SELENOFO60613 162 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 GLCEO94923 617 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 CYC1P08574 325 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 GP1BBP13224 206 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 ZNF19P17023 458 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 SLC26A5P58743 744 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 CTXN1P60606 82 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 RUNX1T1Q06455 604 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 ZFP36L1Q07352 338 aaKnown RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 CBFBQ13951 182 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 EFR3AQ14156 821 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 PON3Q15166 354 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 RPTNQ6XPR3 784 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 PXKQ7Z7A4 578 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 PPP1R3BQ86XI6 285 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 GHDCQ8N2G8 530 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 C10orf53Q8N6V4 93 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 NLGN4YQ8NFZ3 816 aaPredicted RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 OR8K3Q8NH51 312 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 CEP76Q8TAP6 659 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 NEIL3Q8TAT5 605 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 PELI1Q96FA3 418 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 TSPAN32Q96QS1 320 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 GFM1Q96RP9 751 aaKnown RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 ATF6BQ99941 703 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 SOSTQ9BQB4 213 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 SRRQ9GZT4 340 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 SP140LQ9H930 580 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 NCDNQ9UBB6 729 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 COL27A1Q8IZC6 1860 aaPredicted RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 TMEM72A0PK05 275 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 GMFGO60234 142 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 DKK1O94907 266 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 CER1O95813 267 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 NAA10P41227 235 aaPredicted RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 RPS5P46782 204 aaKnown RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 POLR2HP52434 150 aaKnown RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 FBXW4P57775 412 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 MESTQ5EB52 335 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 EMC4Q5J8M3 183 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 PHF19Q5T6S3 580 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 LEG1Q6P5S2 330 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 ARL9Q6T311 187 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 NANOGNBQ7Z5D8 188 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 CPEB2Q7Z5Q1 589 aaKnown RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 ZNF554Q86TJ5 538 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 BPHLQ86WA6 291 aaPredicted RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 TMEM105Q8N8V8 129 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 CEP19Q96LK0 163 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 CCDC86Q9H6F5 360 aaKnown RBP12.85□□□□□ -0.35
LDB3-207ENST00000542786 TAS2R5Q9NYW4 299 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 GRIP1Q9Y3R0 1128 aa12.85□□□□□ -0.35
LDB3-207ENST00000542786 PCNX3Q9H6A9 2034 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 TMED7-TICAM2A0A0A6YYA0 188 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 TRBV11-1A0A0K0K1C0 115 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 MEN1O00255 615 aa12.84□□□□□ -0.35
LDB3-207ENST00000542786 MAGEB4O15481 346 aaPredicted RBP12.84□□□□□ -0.35
LDB3-207ENST00000542786 SUSD5O60279 629 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms