RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 NUDT9Q9BW91 350 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 NOX4Q9NPH5 578 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 APOBEC3BQ9UH17 382 aaKnown RBP13.18□□□□□ -0.3
TRPM1-203ENST00000542188 FGF4P08620 206 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 TRA2BP62995 288 aaKnown RBP13.18□□□□□ -0.3
TRPM1-203ENST00000542188 HSF1Q00613 529 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 LGI3Q8N145 548 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 DOK4Q8TEW6 326 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 CHAC2Q8WUX2 184 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 SLC41A2Q96JW4 573 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 DCAF16Q9NXF7 216 aa13.18□□□□□ -0.3
TRPM1-203ENST00000542188 NFAT5O94916 1531 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 DDAH2O95865 285 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 ADH4P08319 380 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 NTF3P20783 257 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 PTBP1P26599 531 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 SUB1P53999 127 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 LMAN2Q12907 356 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 ARHGAP11BQ3KRB8 267 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 ZNF718Q3SXZ3 478 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 FUBP1Q96AE4 644 aaKnown RBP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 OR51I2Q9H344 312 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 IGSF5Q9NSI5 407 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 ZNF629Q9UEG4 869 aaPredicted RBP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 CAMK2AQ9UQM7 478 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 ENDOGQ14249 297 aaKnown RBP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 EMC10Q5UCC4 262 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 LCTLQ6UWM7 567 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 Q6ZRG5 221 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 HSD3B7Q9H2F3 369 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 SPHK2Q9NRA0 654 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 MRPS28Q9Y2Q9 187 aaKnown RBP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 PPRC1Q5VV67 1664 aaKnown RBP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 SERTM2A0A1B0GWG4 89 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 F10P00742 488 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 FOLR3P41439 243 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 STEAP1BQ6NZ63 245 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 NPSR1Q6W5P4 371 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 TMEM217Q8N7C4 229 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 SFT2D1Q8WV19 159 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 SLC29A1Q99808 456 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 CHRDL1Q9BU40 450 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 ABHD6Q9BV23 337 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 VN1R3Q9BXE9 311 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 OPA3Q9H6K4 179 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 SLAMF7Q9NQ25 335 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 DNMT3BQ9UBC3 853 aaKnown RBP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 GNG12Q9UBI6 72 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 ZNF133P52736 654 aaPredicted RBP13.17□□□□□ -0.3
TRPM1-203ENST00000542188 SLC35A2P78381 396 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 CRMP1Q14194 572 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 LYRM7Q5U5X0 104 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 C14orf80Q86SX3 495 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 C2CD4CQ8TF44 421 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 FAM234AQ9H0X4 552 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 SLC25A32Q9H2D1 315 aa13.17□□□□□ -0.3
TRPM1-203ENST00000542188 A0A0U1RQF3 1178 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 H2AFB1P0C5Y9 115 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 MS4A2Q01362 244 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 FCN2Q15485 313 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 RPL7L1Q6DKI1 246 aaKnown RBP13.16□□□□□ -0.3
TRPM1-203ENST00000542188 PODNL1Q6PEZ8 512 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 ZNF620Q6ZNG0 422 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 OR1J2Q8NGS2 313 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 SOX7Q9BT81 388 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 BOCQ9BWV1 1114 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 OR51B6Q9H340 312 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 A0A1W2PPH5 198 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 G3V3Q6 166 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 ITGB8P26012 769 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 STK11Q15831 433 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 C3orf38Q5JPI3 329 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 OVCH1Q7RTY7 1134 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 GRASPQ7Z6J2 395 aaPredicted RBP13.16□□□□□ -0.3
TRPM1-203ENST00000542188 CD200R1Q8TD46 325 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 GAB3Q8WWW8 586 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 CCNL2Q96S94 520 aaPredicted RBP13.16□□□□□ -0.3
TRPM1-203ENST00000542188 C20orf24Q9BUV8 137 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 DMRT3Q9NQL9 472 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 KLK4Q9Y5K2 254 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 HRH3Q9Y5N1 445 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 ANKUB1A6NFN9 424 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 TCAPO15273 167 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 IL1RNP18510 177 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 MTCP1P56278 107 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 ENTPD8Q5MY95 495 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 ETFRF1Q6IPR1 90 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 SLC6A18Q96N87 628 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 SLC25A21Q9BQT8 299 aaPredicted RBP13.16□□□□□ -0.3
TRPM1-203ENST00000542188 LIN7CQ9NUP9 197 aaKnown RBP13.16□□□□□ -0.3
TRPM1-203ENST00000542188 ABCC6O95255 1503 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 A0A1B0GVG6 124 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 TMEM72A0PK05 275 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 ARNTLO00327 626 aa13.16□□□□□ -0.3
TRPM1-203ENST00000542188 SNRPBP14678 240 aaKnown RBP13.16□□□□□ -0.3
TRPM1-203ENST00000542188 TPPP2P59282 170 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms