RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 DEFA5Q01523 94 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 FZD2Q14332 565 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 NFATC4Q14934 902 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 LTB4RQ15722 352 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 DEFB133Q30KQ1 61 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 SLITRK4Q8IW52 837 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 LINC00471Q8N535 108 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 OR51L1Q8NGJ5 315 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 ZNF671Q8TAW3 534 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 RAD51AP1Q96B01 352 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 SLC25A38Q96DW6 304 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 LCORQ96JN0 433 aaPredicted RBP8.39□□□□□ -1.07
THBS3-211ENST00000541990 SLC38A3Q99624 504 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 MCHR1Q99705 422 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 PDCD1LG2Q9BQ51 273 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 NDC1Q9BTX1 674 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 PINK1Q9BXM7 581 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 ANKRD19PQ9H560 264 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 NOX3Q9HBY0 568 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 PCDHB16Q9NRJ7 776 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 TMEM74BQ9NUR3 256 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 HPF1Q9NWY4 346 aa8.39□□□□□ -1.07
THBS3-211ENST00000541990 RIF1Q5UIP0 2472 aaKnown RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 CUL9Q8IWT3 2517 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 TUBAL3A6NHL2 446 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 AIPO00170 330 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 OR1F1O43749 312 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 B3GALNT1O75752 331 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 MT-ND5P03915 603 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 VSIG10L2P0DP72 767 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 AKT2P31751 481 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 STAT5AP42229 794 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 FNTBP49356 437 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 KHKP50053 298 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 EPHA4P54764 986 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 BDH1Q02338 343 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ST3GAL3Q11203 375 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 PLA2G7Q13093 441 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 DEFB110Q30KQ9 67 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 SLC22A10Q63ZE4 541 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 KIAA0895LQ68EN5 471 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ZNF660Q6AZW8 331 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 GLDNQ6ZMI3 551 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 SCARB1Q8WTV0 552 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ZDHHC1Q8WTX9 485 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 THEM6Q8WUY1 208 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ACOT11Q8WXI4 607 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 CNRIP1Q96F85 164 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 LRRC46Q96FV0 321 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 LINC00615Q96LM1 132 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 OR7D2Q96RA2 312 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 GINS4Q9BRT9 223 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 BCL2L10Q9HD36 194 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ST6GALNAC2Q9UJ37 374 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 CAMK2AQ9UQM7 478 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ZNF175Q9Y473 711 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 TMEM265A0A087WTH1 108 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 A0A1B0GUH1 482 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 C17orf113A0A1B0GUU1 675 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ZNF98A6NK75 572 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 BHLHE40O14503 412 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 SMAD9O15198 467 aaKnown RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 RP2O75695 350 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 TMIGD3P0DMS9 266 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 ZNF35P13682 527 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 S100A11P31949 105 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 IFNGR2P38484 337 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 MC3RP41968 323 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 SEC61A1P61619 476 aaKnown RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 DYRK1AQ13627 763 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 GPR18Q14330 331 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 HSD17B12Q53GQ0 312 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 HACD4Q5VWC8 232 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 DMKNQ6E0U4 476 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 FAM199XQ6PEV8 388 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 DCUN1D3Q8IWE4 304 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 MEIOBQ8N635 442 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 FAM98AQ8NCA5 519 aaKnown RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 OR13C2Q8NGS9 318 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 FANK1Q8TC84 345 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 LCN9Q8WX39 176 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ZNF514Q96K75 400 aaPredicted RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 JAM3Q9BX67 310 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 EPHX3Q9H6B9 360 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 ADGRL4Q9HBW9 690 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 SLC6A20Q9NP91 592 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 SLC35C2Q9NQQ7 365 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 POT1Q9NUX5 634 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 MRTO4Q9UKD2 239 aaKnown RBP8.38□□□□□ -1.07
THBS3-211ENST00000541990 MOKQ9UQ07 419 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 PRELID3BQ9Y3B1 194 aa8.38□□□□□ -1.07
THBS3-211ENST00000541990 DMXL1Q9Y485 3027 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 TRAV27A0A087WT01 109 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 ANKRD61A6NGH8 418 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 OR6C65A6NJZ3 312 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 ACOD1A6NK06 481 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 IDSB3KWA1 339 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 PSMD9O00233 223 aa8.37□□□□□ -1.07
THBS3-211ENST00000541990 MAN2B1O00754 1011 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms