RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 ZNF311Q5JNZ3 666 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 RPS26P11Q5JNZ5 115 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-212ENST00000541866 RNF220Q5VTB9 566 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 NIPAL3Q6P499 406 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 MSANTD1Q6ZTZ1 278 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 CREB3L2Q70SY1 520 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 ZNF525Q8N782 197 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 SLC25A36Q96CQ1 311 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 FBXO17Q96EF6 278 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 TMEM19Q96HH6 336 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 OBP2BQ9NPH6 170 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 SDR39U1Q9NRG7 319 aaPredicted RBP12.49□□□□□ -0.41
COPS7A-212ENST00000541866 RASD1Q9Y272 281 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 PLCE1Q9P212 2302 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 RTTNQ86VV8 2226 aa12.49□□□□□ -0.41
COPS7A-212ENST00000541866 ELOA3DA6NLF2 546 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-212ENST00000541866 C5orf58C9J3I9 102 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 LGI1O95970 557 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 CRYAAP02489 173 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 CSF3P09919 207 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 PRG2P13727 222 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 SELENOPP49908 381 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 MAGOHP61326 146 aaKnown RBP12.48□□□□□ -0.41
COPS7A-212ENST00000541866 LOXL1Q08397 574 aaPredicted RBP12.48□□□□□ -0.41
COPS7A-212ENST00000541866 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 ELOA3BQ3SY89 546 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 TBRG1Q3YBR2 411 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 GTDC1Q4AE62 458 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 SERPINA11Q86U17 422 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 ELOA3Q8NG57 546 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 STK35Q8TDR2 534 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 PROX1Q92786 737 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 VPS33AQ96AX1 596 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 MAELQ96JY0 434 aaKnown RBP12.48□□□□□ -0.41
COPS7A-212ENST00000541866 OR52B2Q96RD2 323 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 KCNK17Q96T54 332 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 RAD21L1Q9H4I0 556 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 RPS6KB2Q9UBS0 482 aa12.48□□□□□ -0.41
COPS7A-212ENST00000541866 CR1P17927 2039 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 CLIC1O00299 241 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 FRS3O43559 492 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 F12P00748 615 aaPredicted RBP12.47□□□□□ -0.41
COPS7A-212ENST00000541866 ZNF43P17038 809 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 STX1BP61266 288 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 SNRPD2P62316 118 aaKnown RBP12.47□□□□□ -0.41
COPS7A-212ENST00000541866 RGNQ15493 299 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 CYB5R2Q6BCY4 276 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 KDM8Q8N371 416 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 OR9I1Q8NGQ6 314 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 OR1K1Q8NGR3 316 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 MFSD8Q8NHS3 518 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 C3orf49Q96BT1 292 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 SLC38A2Q96QD8 506 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 BCL2L10Q9HD36 194 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 PCDHB14Q9Y5E9 798 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 FKBP7Q9Y680 259 aa12.47□□□□□ -0.41
COPS7A-212ENST00000541866 A0A096LPE4 126 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 IGHV1-18A0A0C4DH31 117 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 A0A1W2PPZ6 126 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 RNF212BA8MTL3 300 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 VSTM5A8MXK1 200 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 UPK3AO75631 287 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 NUDT7P0C024 238 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 USF1P22415 310 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-212ENST00000541866 SERPINF1P36955 418 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 RPS5P46782 204 aaKnown RBP12.46□□□□□ -0.41
COPS7A-212ENST00000541866 PDLIM4P50479 330 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 CLDN17P56750 224 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 VLDLRP98155 873 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 HOXC5Q00444 222 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 LGALS3BPQ08380 585 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 C1DQ13901 141 aaKnown RBP12.46□□□□□ -0.41
COPS7A-212ENST00000541866 C6orf52Q5T4I8 152 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 ANKRD16Q6P6B7 361 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 SLC2A7Q6PXP3 512 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 MAVSQ7Z434 540 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 EPHX4Q8IUS5 362 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 BBS10Q8TAM1 723 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 C10orf105Q8TEF2 133 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 MAL2Q969L2 176 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 BOD1Q96IK1 185 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 ZNF317Q96PQ6 595 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-212ENST00000541866 ALKBH3Q96Q83 286 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-212ENST00000541866 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.41
COPS7A-212ENST00000541866 BEX2Q9BXY8 128 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 MOV10Q9HCE1 1003 aaKnown RBP12.46□□□□□ -0.41
COPS7A-212ENST00000541866 A4GALTQ9NPC4 353 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 CDC42EP3Q9UKI2 254 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 CHST2Q9Y4C5 530 aa12.46□□□□□ -0.41
COPS7A-212ENST00000541866 COL6A5A8TX70 2615 aa12.45□□□□□ -0.42
COPS7A-212ENST00000541866 A0A096LNT2 108 aa12.45□□□□□ -0.42
COPS7A-212ENST00000541866 TMEM229AB2RXF0 380 aa12.45□□□□□ -0.42
COPS7A-212ENST00000541866 NR5A2O00482 541 aa12.45□□□□□ -0.42
COPS7A-212ENST00000541866 OR2T1O43869 369 aa12.45□□□□□ -0.42
COPS7A-212ENST00000541866 ZNF500O60304 480 aaPredicted RBP12.45□□□□□ -0.42
COPS7A-212ENST00000541866 NPIPB7O75200 414 aa12.45□□□□□ -0.42
COPS7A-212ENST00000541866 LY6HO94772 140 aa12.45□□□□□ -0.42
COPS7A-212ENST00000541866 PNMTP11086 282 aa12.45□□□□□ -0.42
COPS7A-212ENST00000541866 HOXB1P14653 301 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms