RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 RASGEF1BQ0VAM2 473 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 POU4F3Q15319 338 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 SLC25A35Q3KQZ1 300 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 IQCCQ4KMZ1 466 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 FGD3Q5JSP0 725 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 OTUD3Q5T2D3 398 aaPredicted RBP15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 FAM214BQ7L5A3 538 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 NKAIN4Q8IVV8 208 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 TAAR8Q969N4 342 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 SLC25A36Q96CQ1 311 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 KTI12Q96EK9 354 aaPredicted RBP15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 SGTBQ96EQ0 304 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 ZNF845Q96IR2 970 aaPredicted RBP15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 BCO1Q9HAY6 547 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 MRPL39Q9NYK5 338 aaKnown RBP15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 AP4S1Q9Y587 144 aa15.66■□□□□ 0.1
CLSTN3-210ENST00000540931 IGKV3D-15A0A087WSY6 115 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 OR6C65A6NJZ3 312 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 FTCDNL1E5RQL4 147 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 H0YC42 278 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 J3KTA2 159 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 TNFRSF11BO00300 401 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 SS18L1O75177 396 aaPredicted RBP15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 FKBP6O75344 327 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 YES1P07947 543 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 PEX19P40855 299 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 TPD52P55327 224 aaPredicted RBP15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 ZNF74Q16587 644 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 HDDC2Q7Z4H3 204 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 STK32CQ86UX6 486 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 OR6K3Q8NGY3 331 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 OR5J2Q8NH18 312 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 SLC7A13Q8TCU3 470 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 TMEM255BQ8WV15 326 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 BPIFA2Q96DR5 249 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 CCDC120Q96HB5 630 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 ALPK1Q96QP1 1244 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 BDH2Q9BUT1 245 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 PTDSS2Q9BVG9 487 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 SRXN1Q9BYN0 137 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 CHST11Q9NPF2 352 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 KLHL13Q9P2N7 655 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 STX18Q9P2W9 335 aaKnown RBP15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 DNAJB9Q9UBS3 223 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 FOXD3Q9UJU5 478 aaPredicted RBP15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 CREBBPQ92793 2442 aa15.65■□□□□ 0.1
CLSTN3-210ENST00000540931 A0A087WUU8 490 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 SMAD9O15198 467 aaKnown RBP15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 TGM6O95932 706 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 BGLAPP02818 100 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 FASP25445 335 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 PCYT1AP49585 367 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 PRPS1P60891 318 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 PMS2P3Q13401 168 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 HIST2H2BCQ6DN03 193 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 ABLIM2Q6H8Q1 611 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 C3P1Q6ZMU1 363 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 TMPRSS11FQ6ZWK6 438 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 TSEN54Q7Z6J9 526 aaKnown RBP15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 CA5BP1Q8WTZ4 195 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 UTP4Q969X6 686 aaKnown RBP15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 NRBF2Q96F24 287 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 OXGR1Q96P68 337 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 OSBPL10Q9BXB5 764 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 MAN2C1Q9NTJ4 1040 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 RHCGQ9UBD6 479 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 TESMINQ9Y4I5 508 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 NOX1Q9Y5S8 564 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 ARHGAP21Q5T5U3 1957 aa15.64■□□□□ 0.09
CLSTN3-210ENST00000540931 SH3PXD2BA1X283 911 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 ARRDC5A6NEK1 342 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 ENO4A6NNW6 628 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 OR7A10O76100 309 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 CNOT4O95628 575 aaKnown RBP15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 CH25HO95992 272 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 IFI30P13284 250 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 ZNF43P17038 809 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 FUT1P19526 365 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 GRPRP30550 384 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 DNAJA1P31689 397 aaKnown RBP15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 ZP4Q12836 540 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 RPL13AP3Q6NVV1 102 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 PODNL1Q6PEZ8 512 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 WDR88Q6ZMY6 472 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 NANOGNBQ7Z5D8 188 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 PXKQ7Z7A4 578 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 GALNT5Q7Z7M9 940 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 TSPYL5Q86VY4 417 aaPredicted RBP15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 NRMQ8IXM6 262 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 C9orf106Q8NAJ2 232 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 SSC4DQ8WTU2 575 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 STMN2Q93045 179 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 INTS12Q96CB8 462 aaKnown RBP15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 MEPEQ9NQ76 525 aaPredicted RBP15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 SAMHD1Q9Y3Z3 626 aaKnown RBP15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 LYVE1Q9Y5Y7 322 aa15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 SPENQ96T58 3664 aaKnown RBP15.63■□□□□ 0.09
CLSTN3-210ENST00000540931 MED12Q93074 2177 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 A0A1W2PNV4 684 aa15.62■□□□□ 0.09
CLSTN3-210ENST00000540931 WIPF3A6NGB9 483 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 252.6 ms