RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 C9J4A7 227 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 FAM157AC9JC47 383 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 TLX2O43763 284 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 TMEM127O75204 238 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 OPN1SWP03999 348 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 OPN1LWP04000 364 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 SERPIND1P05546 499 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 TBC1D3HP0C7X1 549 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 GZMBP10144 247 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 PCGF2P35227 344 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 CHRNA7P36544 502 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 OR3A1P47881 315 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 LIMS1P48059 325 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 CAV2P51636 162 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 HMGCS1Q01581 520 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 CHRFAM7AQ494W8 412 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF667Q5HYK9 610 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 MUC20Q8N307 709 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 ARL14Q8N4G2 192 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 CELF5Q8N6W0 485 aaKnown RBP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 GALNT14Q96FL9 552 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 AKR1E2Q96JD6 320 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 LINC00597Q9H2U6 94 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 TRPC4Q9UBN4 977 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 TNFSF18Q9UNG2 199 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 SIP14410 1827 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 A0A0G2JK05 382 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 NAP1L6A6NFF2 107 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 OR51F1A6NGY5 319 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 F5H0A9 414 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 PYCARD-AS1I3L0S3 204 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 MFNGO00587 321 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 TGOLN2O43493 480 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 PCDH7O60245 1069 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BKO60814 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 NDUFB6O95139 128 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BJP06899 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 CLTBP09497 229 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 GPX2P18283 190 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BOP23527 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 TLX1P31314 330 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BBP33778 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 WNT5AP41221 380 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 CCR4P51679 360 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 EFNA5P52803 228 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BDP58876 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BCP62807 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 CDC42EP1Q00587 391 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 DDX39BQ13838 428 aaKnown RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 JOSD1Q15040 202 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST2H2BEQ16778 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 GOLGA7BQ2TAP0 167 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 SLC25A35Q3KQZ1 300 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF770Q6IQ21 691 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF774Q6NX45 483 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 UNQ6126/PRO20091Q6UXV3 157 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 TTLL10Q6ZVT0 673 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 SLC36A1Q7Z2H8 476 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 SMIM15Q7Z3B0 74 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 PXKQ7Z7A4 578 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 LRRC52Q8N7C0 313 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 ACBD4Q8NC06 268 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 OR4D9Q8NGE8 314 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 OR2A12Q8NGT7 310 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 OR8D1Q8WZ84 308 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 EXTL1Q92935 676 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BHQ93079 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 WNT8BQ93098 351 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 OR14A2Q96R54 314 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 CNN2Q99439 309 aaKnown RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BNQ99877 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HIST1H2BMQ99879 126 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 C20orf24Q9BUV8 137 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 POTEKPQ9BYX7 375 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 TRIM2Q9C040 744 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 HRH4Q9H3N8 390 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 KRCC1Q9NPI7 259 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF230Q9UIE0 474 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-214ENST00000540539 A4GNTQ9UNA3 340 aa8.71□□□□□ -1.01
CLIP1-214ENST00000540539 ELOA3CA0A087WX78 387 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-214ENST00000540539 SMCO3A2RU48 225 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 NPEPPSL1A6NEC2 478 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 GPR32O75388 356 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 CD74P04233 296 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 MAS1LP35410 378 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 RBM34P42696 430 aaKnown RBP8.71□□□□□ -1.02
CLIP1-214ENST00000540539 CXCR3P49682 368 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 WDR5P61964 334 aaKnown RBP8.71□□□□□ -1.02
CLIP1-214ENST00000540539 IRF8Q02556 426 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 TLE4Q04727 773 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 VEZF1Q14119 521 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 ATXN7L2Q5T6C5 722 aaPredicted RBP8.71□□□□□ -1.02
CLIP1-214ENST00000540539 FAM27D1Q5T7N8 215 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 GAREM2Q75VX8 874 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 IQCHQ86VS3 1027 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 IQCF1Q8N6M8 205 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 OR2L3Q8NG85 312 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 OR7G2Q8NG99 324 aa8.71□□□□□ -1.02
CLIP1-214ENST00000540539 SLC35F5Q8WV83 523 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms