RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 OR2M2Q96R28 347 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 UBQLN3Q9H347 655 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 METTL7AQ9H8H3 244 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 FBXO9Q9UK97 447 aaPredicted RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF443Q9Y2A4 671 aaPredicted RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 KIAA1549LQ6ZVL6 1849 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 UNC80Q8N2C7 3258 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 A0A0A6YYD5 115 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 A0A1W2PR48 441 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 CDC14CA4D256 554 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 H7C1C5 153 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 DOK2O60496 412 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SLC2A10O95528 541 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 TBX6O95947 436 aaPredicted RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 PDGFAP04085 211 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 PSMB1P20618 241 aaKnown RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 DLX5P56178 289 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ACTBP60709 375 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 LCN6P62502 163 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ACTG1P63261 375 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 CXADRP78310 365 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 NXNL2Q5VZ03 156 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 LCN10Q6JVE6 187 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 OR4K17Q8NGC6 315 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 OR13C3Q8NGS6 347 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 DUSP19Q8WTR2 217 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 GAL3ST3Q96A11 431 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 WDR77Q9BQA1 342 aaPredicted RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ZMAT3Q9HA38 289 aaKnown RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 HHATLQ9HCP6 504 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 GPATCH2Q9NW75 528 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 KCNN3Q9UGI6 736 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 CDHR4A6H8M9 788 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ANKRD61A6NGH8 418 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 KNG1P01042 644 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 CCR5P51681 352 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ELOAQ14241 798 aaKnown RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 OR5M10Q6IEU7 315 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SLC16A12Q6ZSM3 486 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 OR52R1Q8NGF1 315 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 HLA-CQ95604 372 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 FAM131CQ96AQ9 280 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 OPALINQ96PE5 141 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ADOQ96SZ5 270 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 LHX9Q9NQ69 397 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 PLCXD1Q9NUJ7 323 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SVILO95425 2214 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 KIR2DS5A0A0G2JLQ3 304 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 A0A0G2JNG1 304 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 B4DXG7 233 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 KIR2DS3K7RE56 304 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 M0R082 166 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 PEX14O75381 377 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 TGM1P22735 817 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 DDOSTP39656 456 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 KIR2DS5Q14953 304 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.21□□□□□ -0.93
TRAF1-202ENST00000540010 C1orf189Q5VU69 101 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 SAXO2Q658L1 398 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF511Q8NB15 262 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 ZSCAN1Q8NBB4 408 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 KATNB1Q9BVA0 655 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 CDCA4Q9BXL8 241 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 CHST8Q9H2A9 424 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 PRDM7Q9NQW5 492 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 MAN2C1Q9NTJ4 1040 aa9.21□□□□□ -0.93
TRAF1-202ENST00000540010 ZAR1LA6NP61 321 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SSX5O60225 188 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 FCMRO60667 390 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SLC43A1O75387 559 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SIX6O95475 246 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 OPN1LWP04000 364 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 IGHV4-34P06331 123 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 CELA2BP08218 269 aaPredicted RBP9.21□□□□□ -0.94
TRAF1-202ENST00000540010 ELK1P19419 428 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SDHBP21912 280 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 S100A2P29034 98 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 RGS19P49795 217 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 PDX1P52945 283 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 OPCMLQ14982 345 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 NSDHLQ15738 373 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 OR7E24Q6IFN5 339 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 METAP1DQ6UB28 335 aaPredicted RBP9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SLC35D2Q76EJ3 337 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 SYT13Q7L8C5 426 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 KANSL1Q7Z3B3 1105 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 ADAMTS14Q8WXS8 1223 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF566Q969W8 418 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 NMNAT3Q96T66 252 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 C7orf50Q9BRJ6 194 aaKnown RBP9.21□□□□□ -0.94
TRAF1-202ENST00000540010 EIF5A2Q9GZV4 153 aaKnown RBP9.21□□□□□ -0.94
TRAF1-202ENST00000540010 HOXD1Q9GZZ0 328 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 FN3KQ9H479 309 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 GLTPQ9NZD2 209 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 EDARQ9UNE0 448 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 NOX1Q9Y5S8 564 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 COL4A3Q01955 1670 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM221A6NGB7 291 aa9.21□□□□□ -0.94
TRAF1-202ENST00000540010 H3BML4 177 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms