RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PIPOXQ9P0Z9 390 aa12.16□□□□□ -0.46
UBE3B-209ENST00000539584 A0A087WUJ7 227 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 NPIPA5A0A0B4J1W7 369 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 UBE2QL1A1L167 161 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 FAM221BA6H8Z2 402 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 NPIPA7E9PJI5 369 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 ARPC1BO15143 372 aaKnown RBP12.15□□□□□ -0.46
UBE3B-209ENST00000539584 PIN1P1O15428 100 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 P2RX6O15547 441 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 GALR3O60755 368 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-209ENST00000539584 CTSVO60911 334 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 B3GALNT1O75752 331 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 NPIPA8P0DM63 369 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 UBL4AP11441 157 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 ZNF250P15622 560 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 SPI1P17947 270 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 ENPP1P22413 925 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 CFPP27918 469 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 SLC25A1P53007 311 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 DLX5P56178 289 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 Q499Y3 187 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 ZNF684Q5T5D7 378 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 SLC25A25Q6KCM7 469 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 PSRC1Q6PGN9 363 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-209ENST00000539584 FAM220AQ7Z4H9 259 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 SYT9Q86SS6 491 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 ZNF440Q8IYI8 595 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 RFLNBQ8N5W9 214 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 LHFPL5Q8TAF8 219 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 SYNPRQ8TBG9 265 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 HSPA12BQ96MM6 686 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 SFXN2Q96NB2 322 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 G6PC3Q9BUM1 346 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 FGF22Q9HCT0 170 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 SLC6A5Q9Y345 797 aa12.15□□□□□ -0.46
UBE3B-209ENST00000539584 OR2M5A3KFT3 312 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 MCRIP1C9JLW8 97 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 IMPA2O14732 288 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 CTNSO60931 367 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 LDB3O75112 727 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 CFDP00746 253 aaPredicted RBP12.15□□□□□ -0.47
UBE3B-209ENST00000539584 NGFRP08138 427 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 RPL4P36578 427 aaKnown RBP12.15□□□□□ -0.47
UBE3B-209ENST00000539584 NAA10P41227 235 aaPredicted RBP12.15□□□□□ -0.47
UBE3B-209ENST00000539584 P2RX1P51575 399 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 SSBP1Q04837 148 aaKnown RBP12.15□□□□□ -0.47
UBE3B-209ENST00000539584 RBMS2Q15434 407 aaKnown RBP12.15□□□□□ -0.47
UBE3B-209ENST00000539584 NDUFAF6Q330K2 333 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 C2orf27AQ580R0 203 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 HES5Q5TA89 166 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 FCRL6Q6DN72 434 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 DNAAF1Q8NEP3 725 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 OR14C36Q8NHC7 312 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 SMAP2Q8WU79 429 aaPredicted RBP12.15□□□□□ -0.47
UBE3B-209ENST00000539584 FGF13Q92913 245 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 GFI1Q99684 422 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 ORAI3Q9BRQ5 295 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 EVA1BQ9NVM1 165 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 ANKRD10Q9NXR5 420 aa12.15□□□□□ -0.47
UBE3B-209ENST00000539584 CIB4A0PJX0 185 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 BLACEA4D250 179 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 MCIDASD6RGH6 385 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 TOXO94900 526 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 CBX7O95931 251 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 AK4P27144 223 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-209ENST00000539584 HCCSP53701 268 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 RAB38P57729 211 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 GMFBP60983 142 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 RPS4XP62701 263 aaKnown RBP12.14□□□□□ -0.47
UBE3B-209ENST00000539584 ZNF267Q14586 743 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-209ENST00000539584 TCEA2Q15560 299 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 MPPED2Q15777 294 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 ZC3H14Q6PJT7 736 aaKnown RBP12.14□□□□□ -0.47
UBE3B-209ENST00000539584 SLC16A9Q7RTY1 509 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 IZUMO1Q8IYV9 350 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 ARL14Q8N4G2 192 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 GALNT11Q8NCW6 608 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 LIPHQ8WWY8 451 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 PTCHD1Q96NR3 888 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 DPYSL5Q9BPU6 564 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 RXFP3Q9NSD7 469 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 C2orf42Q9NWW7 574 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 ZNF69Q9UC07 566 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 OR5V1Q9UGF6 321 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 PPIEQ9UNP9 301 aaKnown RBP12.14□□□□□ -0.47
UBE3B-209ENST00000539584 FLVCR2Q9UPI3 526 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 PRELID1Q9Y255 219 aa12.14□□□□□ -0.47
UBE3B-209ENST00000539584 ZFPL1O95159 310 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 APBB3O95704 486 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 ALDOBP05062 364 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 CSF1P09603 554 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 S100A11P31949 105 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 PTGS2P35354 604 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 PSG6Q00889 435 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 HTR4Q13639 388 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 STAC2Q6ZMT1 411 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 RNF44Q7L0R7 432 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 DND1Q8IYX4 353 aaKnown RBP12.13□□□□□ -0.47
UBE3B-209ENST00000539584 CA13Q8N1Q1 262 aa12.13□□□□□ -0.47
UBE3B-209ENST00000539584 SDR16C5Q8N3Y7 309 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms