RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 AGFG1P52594 562 aaKnown RBP11.6□□□□□ -0.55
CCDC42-202ENST00000539522 AQP4P55087 323 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 CARD18P57730 90 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 TAS2R41P59536 307 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 RAC3P60763 192 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 PMPCAQ10713 525 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 ST3GAL3Q11203 375 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 FHL1Q13642 323 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 DGCR6Q14129 220 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 TAF11Q15544 211 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 ELOA3BQ3SY89 546 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 NHLRC1Q6VVB1 395 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 B3GNT6Q6ZMB0 384 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 SLC46A3Q7Z3Q1 461 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
CCDC42-202ENST00000539522 CCDC103Q8IW40 242 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 WDFY1Q8IWB7 410 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 LINC00471Q8N535 108 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 ELOA3Q8NG57 546 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 OR4C15Q8NGM1 316 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 STK35Q8TDR2 534 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 RNF128Q8TEB7 428 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 RDH12Q96NR8 316 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 ALPK1Q96QP1 1244 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 TMEM43Q9BTV4 400 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 GABARAPL1Q9H0R8 117 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 Q9H521 79 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 SERINC1Q9NRX5 453 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 RAB26Q9ULW5 256 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 HDGFL3Q9Y3E1 203 aa11.6□□□□□ -0.55
CCDC42-202ENST00000539522 A0A087WUU8 490 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 TRBV4-1A0A0J9YWV2 114 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 EI24O14681 340 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 TNFSF13O75888 250 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 CCNB2O95067 398 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ALPLP05186 524 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 TFPIP10646 304 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 THRBP10828 461 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ANXA8P13928 327 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 FUT1P19526 365 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 PTGER4P35408 488 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 TIMP3P35625 211 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 MAP2K6P52564 334 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 FOXD4Q12950 439 aaPredicted RBP11.59□□□□□ -0.55
CCDC42-202ENST00000539522 PPP1R8Q12972 351 aaKnown RBP11.59□□□□□ -0.55
CCDC42-202ENST00000539522 EXOC3L2Q2M3D2 409 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 RFX4Q33E94 735 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ABLIM2Q6H8Q1 611 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 CCDC71Q8IV32 467 aaPredicted RBP11.59□□□□□ -0.55
CCDC42-202ENST00000539522 LRRC17Q8N6Y2 441 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 OR52J3Q8NH60 311 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 SLC7A13Q8TCU3 470 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ABHD3Q8WU67 409 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 WNT2BQ93097 391 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 DDIT4LQ96D03 193 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 GPA33Q99795 319 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 PSD2Q9BQI7 771 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ANKRD19PQ9H560 264 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 SMURF2Q9HAU4 748 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 RNF6Q9Y252 685 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 TRAPPC4Q9Y296 219 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ZNF175Q9Y473 711 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ORC6Q9Y5N6 252 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 MAGED1Q9Y5V3 778 aaPredicted RBP11.59□□□□□ -0.55
CCDC42-202ENST00000539522 ADGRG4Q8IZF6 3080 aa11.59□□□□□ -0.55
CCDC42-202ENST00000539522 INTS1Q8N201 2190 aaKnown RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 PCNX1Q96RV3 2341 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 ARRDC5A6NEK1 342 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 SLC22A20A6NK97 555 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 GJE1A6NN92 205 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 SULT2B1O00204 365 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 KPNA4O00629 521 aaPredicted RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 DENRO43583 198 aaKnown RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 CYTIPO60759 359 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 ZG16O60844 167 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 AKR7A3O95154 331 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 RCBTB2O95199 551 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 HOXD4P09016 255 aaPredicted RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 MAKP20794 623 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 CBLP22681 906 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 IDUAP35475 653 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 KIR2DL2P43627 348 aaPredicted RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 RAD23AP54725 363 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 PPP2R2BQ00005 443 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 TRAM2Q15035 370 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 OR7A5Q15622 319 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 RIPPLY2Q5TAB7 128 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 FAHD1Q6P587 224 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 PODNL1Q6PEZ8 512 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 GCNT2Q8N0V5 402 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 DHRSXQ8N5I4 330 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 TMEM99Q8N816 258 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 RELL2Q8NC24 303 aaPredicted RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 MFSD8Q8NHS3 518 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 TMEM239Q8WW34 195 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 ITLN2Q8WWU7 325 aaPredicted RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 MPP4Q96JB8 637 aa11.58□□□□□ -0.56
CCDC42-202ENST00000539522 SMPD3Q9NY59 655 aaPredicted RBP11.58□□□□□ -0.56
CCDC42-202ENST00000539522 SELENONQ9NZV5 590 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms