RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 ZNF7P17097 686 aaPredicted RBP11.47□□□□□ -0.57
USP3-203ENST00000538686 TMEM11P17152 192 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 TYMPP19971 482 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 AHRP35869 848 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 MAP3K8P41279 467 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 OMPP47874 163 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 PPM1FP49593 454 aaPredicted RBP11.47□□□□□ -0.57
USP3-203ENST00000538686 HBA1P69905 142 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 ACTBL2Q562R1 376 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 AWAT2Q6E213 333 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 FAM199XQ6PEV8 388 aaPredicted RBP11.47□□□□□ -0.57
USP3-203ENST00000538686 FAM24BQ8N5W8 94 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 OR7G2Q8NG99 324 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 OR1J2Q8NGS2 313 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 C1orf216Q8TAB5 229 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 M1APQ8TC57 530 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 GAL3ST3Q96A11 431 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 KIRREL1Q96J84 757 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 TGM7Q96PF1 710 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 ZNF385AQ96PM9 386 aaKnown RBP11.47□□□□□ -0.57
USP3-203ENST00000538686 SMOQ99835 787 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 MICU1Q9BPX6 476 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 DDA1Q9BW61 102 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 ATG5Q9H1Y0 275 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 PRDM7Q9NQW5 492 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 TDP1Q9NUW8 608 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 KCNE5Q9UJ90 142 aa11.47□□□□□ -0.57
USP3-203ENST00000538686 PHIPQ8WWQ0 1821 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 A0A087WUJ7 227 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 TEX13DA0A0J9YY54 714 aaPredicted RBP11.46□□□□□ -0.57
USP3-203ENST00000538686 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 SURF4O15260 269 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 SNRNP70P08621 437 aaKnown RBP11.46□□□□□ -0.57
USP3-203ENST00000538686 TBC1D3HP0C7X1 549 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 FAM157CP0CG43 387 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 C6P13671 934 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 RAC2P15153 192 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 TAF13Q15543 124 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 ARTNQ5T4W7 220 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 ZNF385CQ66K41 422 aaPredicted RBP11.46□□□□□ -0.57
USP3-203ENST00000538686 TBC1D3GQ6DHY5 549 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 MRM1Q6IN84 353 aaKnown RBP11.46□□□□□ -0.57
USP3-203ENST00000538686 DHRS11Q6UWP2 260 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 HEPN1Q6WQI6 88 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 GLB1L2Q8IW92 636 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 ZNF610Q8N9Z0 462 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 OR6T1Q8NGN1 323 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 RSC1A1Q92681 617 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 PSMG2Q969U7 264 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 GALNT14Q96FL9 552 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 OR51I1Q9H343 314 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 EXO5Q9H790 373 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 FKRPQ9H9S5 495 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 FN3KRPQ9HA64 309 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 BRF2Q9HAW0 419 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 A4GALTQ9NPC4 353 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 ZNF337Q9Y3M9 751 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 MTCH2Q9Y6C9 303 aa11.46□□□□□ -0.57
USP3-203ENST00000538686 TRBV23OR9-2A0A075B6M9 112 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 GNG14A0A1W2PPG7 69 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 DAPL1A0PJW8 107 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 IQCF5A8MTL0 148 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 H7BY64 318 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 M0R143 59 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 TSPAN3O60637 253 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 CYTIPO60759 359 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 MAOAP21397 527 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 TSPAN31Q12999 210 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 SLC10A1Q14973 349 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 RPE65Q16518 533 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 DCAF10Q5QP82 559 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 ZNF574Q6ZN55 896 aaPredicted RBP11.45□□□□□ -0.58
USP3-203ENST00000538686 BPIFB2Q8N4F0 458 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 MORN4Q8NDC4 146 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 GPR32P1Q8NGA4 272 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 OR13D1Q8NGV5 346 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 OR2L8Q8NGY9 312 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 DUSP19Q8WTR2 217 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 ZNF607Q96SK3 696 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 ORAI3Q9BRQ5 295 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 PLA2G12AQ9BZM1 189 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 CIPCQ9C0C6 399 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 NRSN2Q9GZP1 204 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 A4GNTQ9UNA3 340 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 FOXJ3Q9UPW0 622 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 KIAA1671Q9BY89 1806 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 SMIM28A0A1B0GU29 152 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 FAM157AC9JC47 383 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 SOCS7O14512 581 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 ITGB1BP1O14713 200 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 GPR39O43194 453 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 GPR37L1O60883 481 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 CHRM4P08173 479 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 ANXA4P09525 319 aaPredicted RBP11.45□□□□□ -0.58
USP3-203ENST00000538686 HLA-GP17693 338 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 OPRD1P41143 372 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 SULT1A1P50225 295 aa11.45□□□□□ -0.58
USP3-203ENST00000538686 UBE2MP61081 183 aaKnown RBP11.45□□□□□ -0.58
USP3-203ENST00000538686 SSBP1Q04837 148 aaKnown RBP11.45□□□□□ -0.58
USP3-203ENST00000538686 SCGB2B2Q4G0G5 96 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms