RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 APOOLQ6UXV4 268 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 CPOQ8IVL8 374 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 MAML2Q8IZL2 1156 aaPredicted RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 LNX2Q8N448 690 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 ZNF485Q8NCK3 441 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 C19orf18Q8NEA5 215 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 FAM71CQ8NEG0 241 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 OR4F15Q8NGB8 312 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 DPYSL5Q9BPU6 564 aa9.82□□□□□ -0.84
CLIP1-210ENST00000538120 RBFOX1Q9NWB1 397 aaKnown RBP9.82□□□□□ -0.84
CLIP1-210ENST00000538120 A0A0C4DFX4 3053 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 TRAV27A0A087WT01 109 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 A0A1B0GX78 115 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 A0A1W2PQM1 296 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 SNTNA6NMZ2 147 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 EFCAB7A8K855 629 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 C12orf71A8MTZ7 269 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 LCE2BO14633 110 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 RCBTB2O95199 551 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 CRYZL1O95825 349 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 AVPP01185 164 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 S100A6P06703 90 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 PNLIPP16233 465 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 RORAP35398 523 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 B2MP61769 119 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 GALEQ14376 348 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ELAVL1Q15717 326 aaKnown RBP9.81□□□□□ -0.84
CLIP1-210ENST00000538120 HLA-BQ31612 363 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 TRIQKQ629K1 86 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ULK3Q6PHR2 472 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 SMARCD3Q6STE5 483 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 COX15Q7KZN9 410 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 BMP8AQ7Z5Y6 402 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 CDK20Q8IZL9 346 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 OR51A7Q8NH64 312 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 OR4C6Q8NH72 309 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 TRIM63Q969Q1 353 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ZNF524Q96C55 264 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 TNFRSF13CQ96RJ3 184 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 SOSTQ9BQB4 213 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 TMED9Q9BVK6 235 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 HCAR1Q9BXC0 346 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 TEX12Q9BXU0 123 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 GON7Q9BXV9 100 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 VN1R1Q9GZP7 353 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 MCCC2Q9HCC0 563 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ADAMTS20P59510 1910 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 C2orf92A0A1B0GVN3 265 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 FAM240BA0A1B0GVZ2 78 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 TMEM129A0AVI4 362 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 IRGMA1A4Y4 181 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 CPED1A4D0V7 1026 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 J3QRE1 110 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 SLC30A4O14863 429 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 LYRM1O43325 122 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 SIGLEC6O43699 453 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 SAGP10523 405 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-210ENST00000538120 MYL12AP19105 171 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ADH7P40394 386 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 AGFG1P52594 562 aaKnown RBP9.81□□□□□ -0.84
CLIP1-210ENST00000538120 FOXL2P58012 376 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 CCL7P80098 99 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ZXDAP98168 799 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 FOXK2Q01167 660 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 CSTF1Q05048 431 aaKnown RBP9.81□□□□□ -0.84
CLIP1-210ENST00000538120 NR0B2Q15466 257 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ARHGAP40Q5TG30 622 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 YOD1Q5VVQ6 348 aaPredicted RBP9.81□□□□□ -0.84
CLIP1-210ENST00000538120 CXXC5Q7LFL8 322 aaKnown RBP9.81□□□□□ -0.84
CLIP1-210ENST00000538120 C9orf40Q8IXQ3 194 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 PRSS58Q8IYP2 241 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ELMOD2Q8IZ81 293 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 GATSQ8NAP1 163 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 RFKQ969G6 155 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ATF6BQ99941 703 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 KLHDC3Q9BQ90 382 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 MED20Q9H944 212 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 KLHL21Q9UJP4 597 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
CLIP1-210ENST00000538120 HSPB11Q9Y547 144 aa9.81□□□□□ -0.84
CLIP1-210ENST00000538120 ZC3H12DA2A288 527 aaKnown RBP9.8□□□□□ -0.84
CLIP1-210ENST00000538120 FRG2CA6NGY1 282 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 GNB5O14775 395 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 TOX3O15405 576 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-210ENST00000538120 UTS2O95399 124 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 C1QBP02746 253 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 BMP7P18075 431 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 OR3A3P47888 321 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 TNK1Q13470 666 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 TPBGQ13641 420 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 TMEM44Q2T9K0 475 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 SIGIRRQ6IA17 410 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 RPL13AP3Q6NVV1 102 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 NIPAL3Q6P499 406 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 SLC38A9Q8NBW4 561 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 OR52L1Q8NGH7 329 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 PTP4A1Q93096 173 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 C3orf49Q96BT1 292 aa9.8□□□□□ -0.84
CLIP1-210ENST00000538120 LCORQ96JN0 433 aaPredicted RBP9.8□□□□□ -0.84
CLIP1-210ENST00000538120 WACQ9BTA9 647 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms