RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 UBAP1Q9NZ09 502 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 ASH2LQ9UBL3 628 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 DUSP13Q9UII6 198 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 KCNE5Q9UJ90 142 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 TRAPPC4Q9Y296 219 aa7.02□□□□□ -1.29
CLIP1-206ENST00000535290 POLR3HQ9Y535 204 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 SPIN1Q9Y657 262 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-206ENST00000535290 IGHV1-69-2A0A0G2JMI3 117 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 A0A1W2PPW3 197 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 C5orf63A6NC05 138 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 PDPK1O15530 556 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 EIF1BO60739 113 aaKnown RBP7.01□□□□□ -1.29
CLIP1-206ENST00000535290 FOXH1O75593 365 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 OPN1MWP04001 364 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 CSF1P09603 554 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 UBTFL6P0CB48 400 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-206ENST00000535290 OPN1MW2P0DN77 364 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 OPN1MW3P0DN78 364 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF35P13682 527 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF12P17014 697 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 EFNA1P20827 205 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-206ENST00000535290 CLK1P49759 484 aaKnown RBP7.01□□□□□ -1.29
CLIP1-206ENST00000535290 CLCQ05315 142 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 C2orf68Q2NKX9 166 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 GLIPR1L2Q4G1C9 344 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 SPDYAQ5MJ70 313 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 DCST2Q5T1A1 773 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 C9orf139Q6ZV77 190 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 CCDC91Q7Z6B0 441 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 TMEM99Q8N816 258 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 IL17RDQ8NFM7 739 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 METTL6Q8TCB7 284 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 ACTRT1Q8TDG2 376 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 FAM120BQ96EK7 910 aaKnown RBP7.01□□□□□ -1.29
CLIP1-206ENST00000535290 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 NAA11Q9BSU3 229 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-206ENST00000535290 CHIAQ9BZP6 476 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 VPS11Q9H270 941 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 SERHL2Q9H4I8 314 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 MARCH7Q9H992 704 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 SLC6A13Q9NSD5 602 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 AURKAIP1Q9NWT8 199 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-206ENST00000535290 GRHL1Q9NZI5 618 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 SEC14L4Q9UDX3 406 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 TIMM22Q9Y584 194 aa7.01□□□□□ -1.29
CLIP1-206ENST00000535290 ZC3H12DA2A288 527 aaKnown RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 SERTM1A2A2V5 107 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 C17orf100A8MU93 164 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 SRRM5B3KS81 715 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 CLDN25C9JDP6 229 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 ANKRD28O15084 1053 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 SMIM24O75264 130 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 URI1O94763 535 aaPredicted RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 AKR7A3O95154 331 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 RBP1P09455 135 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 HMOX2P30519 316 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 RYKP34925 604 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 ROR2Q01974 943 aaKnown RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 HNRNPA0Q13151 305 aaKnown RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 PDCD1Q15116 288 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 RASA2Q15283 850 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 FXNQ16595 210 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 DEFB112Q30KQ8 113 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF662Q6ZS27 426 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 GPRIN3Q6ZVF9 776 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 USP51Q70EK9 711 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 OLIG3Q7RTU3 272 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 GRINAQ7Z429 371 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 GPAT4Q86UL3 456 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 PARP8Q8N3A8 854 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 OR52E2Q8NGJ4 325 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 KIF18AQ8NI77 898 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 RAB1CQ92928 201 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 TRIM44Q96DX7 344 aaPredicted RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF837Q96EG3 531 aaPredicted RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 TIMD4Q96H15 378 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 TSPAN32Q96QS1 320 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 KCNA7Q96RP8 456 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 SLC30A2Q9BRI3 323 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 SF3B5Q9BWJ5 86 aaKnown RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 C1QTNF3Q9BXJ4 246 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 PRDM13Q9H4Q3 707 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 HINT3Q9NQE9 182 aaKnown RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 SIRT3Q9NTG7 399 aaPredicted RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 ZCCHC3Q9NUD5 404 aaKnown RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 TAAR3PQ9P1P4 343 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 ZNF346Q9UL40 294 aaKnown RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 TMCO1Q9UM00 188 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 EPB41L3Q9Y2J2 1087 aaPredicted RBP7□□□□□ -1.29
CLIP1-206ENST00000535290 NOX1Q9Y5S8 564 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 INSIG2Q9Y5U4 225 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 PLXNB1O43157 2135 aa7□□□□□ -1.29
CLIP1-206ENST00000535290 TMEM72A0PK05 275 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 ISPDA4D126 451 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 A8MT66 165 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 NPIPB8E9PQR5 432 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 H0YL77 283 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 FRS3O43559 492 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 AKAP10O43572 662 aa6.99□□□□□ -1.29
CLIP1-206ENST00000535290 PIP5K1CO60331 668 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms