RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 RCE1Q9Y256 329 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 PCDHGA5Q9Y5G8 931 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 PCDHGA1Q9Y5H4 931 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 A0A1W2PRQ8 180 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 PRAMEF27A3QJZ7 478 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 PHOX2AO14813 284 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 PCDH7O60245 1069 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 PITPNBP48739 271 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 FZD2Q14332 565 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 DUOXA1Q1HG43 343 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 MED27Q6P2C8 311 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 UNQ6126/PRO20091Q6UXV3 157 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 NAGSQ8N159 534 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 OR10R2Q8NGX6 335 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 C16orf78Q8WTQ4 265 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 CNTNAP3BQ96NU0 1288 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 REG4Q9BYZ8 158 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 TOLLIPQ9H0E2 274 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 MAGIXQ9H6Y5 334 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 PISDQ9UG56 409 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 APOBEC3BQ9UH17 382 aaKnown RBP8.33□□□□□ -1.08
SF3B2-216ENST00000534765 RASD1Q9Y272 281 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 A0A1B0GV50 99 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 MED6O75586 246 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 UBXN7O94888 489 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 KCNK5O95279 499 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 FURINP09958 794 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 BCKDHBP21953 392 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 S100A7P31151 101 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 CRYBB2P43320 205 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 KIR3DL1P43629 444 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 EVX1P49640 407 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 SEC61A1P61619 476 aaKnown RBP8.33□□□□□ -1.08
SF3B2-216ENST00000534765 DGCR2P98153 550 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 VMACQ2NL98 169 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 HSD17B13Q7Z5P4 300 aaPredicted RBP8.33□□□□□ -1.08
SF3B2-216ENST00000534765 ATCAYQ86WG3 371 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 KLHL36Q8N4N3 616 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 OR52B4Q8NGK2 314 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 DNAJA3Q96EY1 480 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 MS4A4EQ96PG1 132 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 ZNF629Q9UEG4 869 aaPredicted RBP8.33□□□□□ -1.08
SF3B2-216ENST00000534765 BSNQ9UPA5 3926 aa8.33□□□□□ -1.08
SF3B2-216ENST00000534765 IGHV1OR15-9A0A0B4J2B8 117 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 GXYLT2A0PJZ3 443 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 ZNF729A6NN14 1252 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 CACNB4O00305 520 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 UGDHO60701 494 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 YIF1AO95070 293 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 SEMA4FO95754 770 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 SLC35G4P0C7Q5 338 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 ACVR2AP27037 513 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 TIA1P31483 386 aaKnown RBP eCLIP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 RAD52P43351 418 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 RPS10P46783 165 aaKnown RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 NPBWR1P48145 328 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 MRPS21P82921 87 aaKnown RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 GPR18Q14330 331 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 NDUFAF6Q330K2 333 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 PTCRAQ6ISU1 281 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 PLBD1Q6P4A8 553 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 GDPGP1Q6ZNW5 385 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 QSOX2Q6ZRP7 698 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 Q6ZTK2 550 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 SLC9B2Q86UD5 537 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 CLDN22Q8N7P3 220 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 OR10D4PQ8NGN7 298 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 BSCL2Q96G97 398 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 WDFY2Q96P53 400 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 POLR2J3Q9H1A7 115 aaKnown RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 CRLF2Q9HC73 371 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 CAPN10Q9HC96 672 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 MRPS30Q9NP92 439 aaKnown RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 STARD5Q9NSY2 213 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 MEIKINA0A087WXM9 373 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 A8MXK9 166 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 ZNF593O00488 134 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 C6orf47O95873 294 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 SRFP11831 508 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 EIF2S3P41091 472 aaKnown RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 CRISP1P54107 249 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 NFATC4Q14934 902 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 NHLRC3Q5JS37 347 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 FAM71E1Q6IPT2 247 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 CDC73Q6P1J9 531 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 LCTLQ6UWM7 567 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 VN1R4Q7Z5H5 301 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 C11orf65Q8NCR3 313 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 OR2L3Q8NG85 312 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 MS4A8Q9BY19 250 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 TWSG1Q9GZX9 223 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 ENKD1Q9H0I2 346 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 LANCL2Q9NS86 450 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 WSB2Q9NYS7 404 aaPredicted RBP8.32□□□□□ -1.08
SF3B2-216ENST00000534765 FAM96BQ9Y3D0 163 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 FGF2P09038 288 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 FBP1P09467 338 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 KLBQ86Z14 1044 aa8.32□□□□□ -1.08
SF3B2-216ENST00000534765 GTPBP8Q8N3Z3 284 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms