RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ATP23Q9Y6H3 246 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 NSD1Q96L73 2696 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 ELOA3DA6NLF2 546 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 KIAA1324LA8MWY0 1029 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 TMEM229AB2RXF0 380 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 CRLF1O75462 422 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 BMP4P12644 408 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 ETS2P15036 469 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 HOXB9P17482 250 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 APOBEC3AP31941 199 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 RPS5P46782 204 aaKnown RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 MRPL19P49406 292 aaKnown RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 SELENOPP49908 381 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 NUDT6P53370 316 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 EGR4Q05215 589 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 ELOA3BQ3SY89 546 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 LRIF1Q5T3J3 769 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 C11orf71Q6IPW1 123 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 KLHL24Q6TFL4 600 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 B3GLCTQ6Y288 498 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 EPHX4Q8IUS5 362 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 KDM8Q8N371 416 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 ELOA3Q8NG57 546 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 MFSD8Q8NHS3 518 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 BBS10Q8TAM1 723 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 SPDL1Q96EA4 605 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 BOD1Q96IK1 185 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 CCDC28BQ9BUN5 200 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 RSPO3Q9BXY4 272 aaPredicted RBP7.8□□□□□ -1.16
COPB1-211ENST00000534234 CCDC167Q9P0B6 97 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 RPS6KB2Q9UBS0 482 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 RASD1Q9Y272 281 aa7.8□□□□□ -1.16
COPB1-211ENST00000534234 HEATR5AQ86XA9 2040 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 PRR14LQ5THK1 2151 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 HIVEP2P31629 2446 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 OR6C65A6NJZ3 312 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 FTCDNL1E5RQL4 147 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 ZNF587BE7ETH6 402 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 NR5A2O00482 541 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 LGI1O95970 557 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 ARAFP10398 606 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 PNMTP11086 282 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 ZNF43P17038 809 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 PRKAR1BP31321 381 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 AQP5P55064 265 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 CHRNB3Q05901 458 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 LGALS3BPQ08380 585 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 DMTNQ08495 405 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 TBRG1Q3YBR2 411 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 PAGE3Q5JUK9 113 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 REEP3Q6NUK4 255 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 NIPAL3Q6P499 406 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 MSRB3Q8IXL7 192 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 OR10H5Q8NGA6 315 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 NFKBIDQ8NI38 313 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 HTRA1Q92743 480 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 KTI12Q96EK9 354 aaPredicted RBP7.79□□□□□ -1.16
COPB1-211ENST00000534234 PTDSS2Q9BVG9 487 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 PRR14Q9BWN1 585 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 SLC52A3Q9NQ40 469 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 VAPAQ9P0L0 249 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 ADAM21Q9UKJ8 722 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 MOKQ9UQ07 419 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 PMF1-BGLAPU3KQ54 211 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 CSPG4Q6UVK1 2322 aa7.79□□□□□ -1.16
COPB1-211ENST00000534234 FREM1Q5H8C1 2179 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 IGHV4-30-2A0A087WSY4 118 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 A0A1B0GWA3 101 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 ATP6V1G2-DDX39BF2Z307 99 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 H7C417 338 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 TLX2O43763 284 aaPredicted RBP7.78□□□□□ -1.16
COPB1-211ENST00000534234 OR2T1O43869 369 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 GPRIN2O60269 458 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 TPST1O60507 370 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 UPK3AO75631 287 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 HOXB1P14653 301 aaPredicted RBP7.78□□□□□ -1.16
COPB1-211ENST00000534234 PPIBP23284 216 aaKnown RBP7.78□□□□□ -1.16
COPB1-211ENST00000534234 PAX7P23759 505 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 GTF2E2P29084 291 aaKnown RBP7.78□□□□□ -1.16
COPB1-211ENST00000534234 CLDN17P56750 224 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 DSCR9P59020 149 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 UBE2NP61088 152 aaKnown RBP7.78□□□□□ -1.16
COPB1-211ENST00000534234 CDK6Q00534 326 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 AGKQ53H12 422 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 GCNT6Q5T4J0 391 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 CLEC2AQ6UVW9 174 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 NET1Q7Z628 596 aaPredicted RBP7.78□□□□□ -1.16
COPB1-211ENST00000534234 KRT73Q86Y46 540 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 C10orf111Q8N326 155 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 LSMEM1Q8N8F7 131 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 OR1K1Q8NGR3 316 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 DNAJA4Q8WW22 397 aaPredicted RBP7.78□□□□□ -1.16
COPB1-211ENST00000534234 DYDC1Q8WWB3 177 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 BCL2L2Q92843 193 aaPredicted RBP7.78□□□□□ -1.16
COPB1-211ENST00000534234 TAAR8Q969N4 342 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 ATP6V1G3Q96LB4 118 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 OXGR1Q96P68 337 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 MDFIQ99750 246 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 SPATA5L1Q9BVQ7 753 aa7.78□□□□□ -1.16
COPB1-211ENST00000534234 C12orf10Q9HB07 376 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms