RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 M0QX08 132 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 M0R082 166 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 M0R1B8 84 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF432O94892 652 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 CD3EP07766 207 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 INHBBP09529 407 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 GRPRP30550 384 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 ACVR1BP36896 505 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 MAGEA8P43361 318 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 HTR3AP46098 478 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 CLK1P49759 484 aaKnown RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 IRX1P78414 480 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 FADDQ13158 208 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 OR1Q1Q15612 314 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 REEP3Q6NUK4 255 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 DHRS4L2Q6PKH6 230 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 AAED1Q7RTV5 226 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 MEX3DQ86XN8 651 aaKnown RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 DPP10Q8N608 796 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 LRRC17Q8N6Y2 441 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 POU5F2Q8N7G0 328 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 OR6T1Q8NGN1 323 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 OR10A6Q8NH74 314 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 VANGL1Q8TAA9 524 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF417Q8TAU3 575 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 SMAP2Q8WU79 429 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 OIT3Q8WWZ8 545 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 COX4I2Q96KJ9 171 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 ALKBH3Q96Q83 286 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF587Q96SQ5 575 aaPredicted RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 TACO1Q9BSH4 297 aaKnown RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 EMC6Q9BV81 110 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 HDHD5Q9BXW7 423 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 TMEM38AQ9H6F2 299 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 KAT8Q9H7Z6 458 aaKnown RBP8.43□□□□□ -1.06
SSBP3-215ENST00000533946 NOX3Q9HBY0 568 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 SAR1AQ9NR31 198 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 ASB6Q9NWX5 421 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 ARMCX1Q9P291 453 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 KLHL14Q9P2G3 628 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 MALT1Q9UDY8 824 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF232Q9UNY5 417 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 GMEB1Q9Y692 573 aa8.43□□□□□ -1.06
SSBP3-215ENST00000533946 A0A0B4J2E0 115 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 LOC100653049A0A140TA62 436 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 A0A1B0GX12 115 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 CPSF4LA6NMK7 179 aaKnown RBP8.42□□□□□ -1.06
SSBP3-215ENST00000533946 C5orf58C9J3I9 102 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 ATP6V1G2-DDX39BF2Z307 99 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 TRAF3IP2O43734 574 aaPredicted RBP8.42□□□□□ -1.06
SSBP3-215ENST00000533946 KRT34O76011 436 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 GOSR1O95249 250 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 CNOT4O95628 575 aaKnown RBP8.42□□□□□ -1.06
SSBP3-215ENST00000533946 BGLAPP02818 100 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 GPIP06744 558 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 ETS2P15036 469 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 FUT1P19526 365 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 CD40P25942 277 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 PRKAR1BP31321 381 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 ANXA11P50995 505 aaKnown RBP8.42□□□□□ -1.06
SSBP3-215ENST00000533946 ATP5J2P56134 94 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 CLDN17P56750 224 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 KLF10Q13118 480 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 NFYCQ13952 458 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 MSMPQ1L6U9 139 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 TIMM23BQ5SRD1 257 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 PRAMEF8Q5VWM4 474 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 PRAMEF7Q5VXH5 474 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 CARD17Q5XLA6 110 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 NANOGP8Q6NSW7 305 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 NIPAL3Q6P499 406 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 C20orf204Q6ZNR8 217 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 ZNF440Q8IYI8 595 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 FGFBP3Q8TAT2 258 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 RNF217Q8TC41 542 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 PMM1Q92871 262 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 C18orf12Q96KH6 178 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 PIP5K1AQ99755 562 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 ARHGDIGQ99819 225 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 TRAF4Q9BUZ4 470 aaPredicted RBP8.42□□□□□ -1.06
SSBP3-215ENST00000533946 GSX2Q9BZM3 304 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 AMBRA1Q9C0C7 1298 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 OR10A4Q9H209 315 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 NANOGQ9H9S0 305 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 SLC17A5Q9NRA2 495 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 MED29Q9NX70 200 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 CISD1Q9NZ45 108 aaKnown RBP8.42□□□□□ -1.06
SSBP3-215ENST00000533946 CALML5Q9NZT1 146 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 EMC3Q9P0I2 261 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 B3GALT5Q9Y2C3 310 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 IFT52Q9Y366 437 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 NDUFAF1Q9Y375 327 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 SPIN1Q9Y657 262 aaPredicted RBP8.42□□□□□ -1.06
SSBP3-215ENST00000533946 ABCA1O95477 2261 aa8.42□□□□□ -1.06
SSBP3-215ENST00000533946 IGHV1-18A0A0C4DH31 117 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 ELOA3DA6NLF2 546 aaPredicted RBP8.41□□□□□ -1.06
SSBP3-215ENST00000533946 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 DNPH1O43598 174 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 GPRIN2O60269 458 aa8.41□□□□□ -1.06
SSBP3-215ENST00000533946 SLC6A2P23975 617 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms