RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 BHLHA9Q7RTU4 235 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 DNAJA3Q96EY1 480 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 SLC41A2Q96JW4 573 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 CPPED1Q9BRF8 314 aaPredicted RBP10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 SLC23A2Q9UGH3 650 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 MOKQ9UQ07 419 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 SMCHD1A6NHR9 2005 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 SSX5O60225 188 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 CHRM4P08173 479 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 KCTD20Q7Z5Y7 419 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 VRK2Q86Y07 508 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 ACOT13Q9NPJ3 140 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 KLHL13Q9P2N7 655 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 TVP23AA6NH52 213 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 DNAJB6O75190 326 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 GM2AP17900 193 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 ARNTP27540 789 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 SSTR4P31391 388 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 SPARTQ8N0X7 666 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 DNAAF1Q8NEP3 725 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 CNOT9Q92600 299 aaKnown RBP10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 ARL11Q969Q4 196 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 APH1AQ96BI3 265 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 MSLNLQ96KJ4 702 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 TMEM38AQ9H6F2 299 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 UNKLQ9H9P5 680 aaKnown RBP10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 CD300AQ9UGN4 299 aa10.42□□□□□ -0.74
AMBRA1-211ENST00000533727 A0A0G2JMP0 313 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SGCEO43556 437 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 IFNA17P01571 189 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SUMO3P55854 103 aaPredicted RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SELENBP1Q13228 472 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SLC14A1Q13336 389 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ZNF585AQ6P3V2 769 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SIRT6Q8N6T7 355 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 TMEM102Q8N9M5 508 aaPredicted RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 CPEB3Q8NE35 698 aaKnown RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR4M2Q8NGB6 313 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ST8SIA1Q92185 356 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 PBDC1Q9BVG4 233 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 GPR87Q9BY21 358 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ZNF436Q9C0F3 470 aaPredicted RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 UCK1Q9HA47 277 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ELOVL3Q9HB03 270 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 PRMT8Q9NR22 394 aaPredicted RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 MED17Q9NVC6 651 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 NDRG3Q9UGV2 375 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 F5P12259 2224 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 TEX51A0A1B0GUA7 166 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 TRIM64A6NGJ6 449 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 TRIM64BA6NI03 449 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 KIR2DL1P43626 348 aaPredicted RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 MAP2K6P52564 334 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 PNLIPRP2P54317 469 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 POU4F3Q15319 338 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 PMS2CLQ68D20 193 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 WDR53Q7Z5U6 358 aaPredicted RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR6Q1Q8NGQ2 317 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR5W2Q8NH69 310 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR5AK2Q8NH90 309 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 GCDHQ92947 438 aaPredicted RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 C3orf30Q96M34 536 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ZNF442Q9H7R0 627 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 CLEC1BQ9P126 229 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 IGLV3-16A0A075B6K0 115 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 LOC105369274A0A096LPK9 316 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 PPP6CO00743 305 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 PEX14O75381 377 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 RGS9O75916 674 aaPredicted RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 CHRNB4P30926 498 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ALDH3B2P48448 385 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SIRPAP78324 504 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 CDK5R2Q13319 367 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 CHRFAM7AQ494W8 412 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ZMAT1Q5H9K5 638 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 NIPAL3Q6P499 406 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 Q6ZNX1 250 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SLC35F3Q8IY50 421 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR4N4Q8N0Y3 316 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 DTX3Q8N9I9 347 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SIMC1Q8NDZ2 872 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR2A1Q8NGT9 310 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 CENPOQ9BU64 300 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR52D1Q9H346 318 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ASB4Q9Y574 426 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 ARPC5O15511 151 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 B4GAT1O43505 415 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 DRD3P35462 400 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 RPS5P46782 204 aaKnown RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 PPIAP62937 165 aaKnown RBP10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 SSPNQ14714 243 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR5M10Q6IEU7 315 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 OR2A2Q6IF42 318 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 NAXEQ8NCW5 288 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 RHOXF1Q8NHV9 184 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 WDR20Q8TBZ3 569 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 MYO7AQ13402 2215 aa10.41□□□□□ -0.74
AMBRA1-211ENST00000533727 DLEC1Q9Y238 1755 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms