RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 LY6G6DO95868 133 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 PNMTP11086 282 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 HTR2AP28223 471 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 MPGP29372 298 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 SELENOPP49908 381 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 IRX1P78414 480 aaPredicted RBP9.17□□□□□ -0.94
CAPN1-225ENST00000533704 TGFBR3Q03167 851 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 VEZF1Q14119 521 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 SELPLGQ14242 412 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 RUNDC3AQ59EK9 446 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 ALG10BQ5I7T1 473 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 NIPAL3Q6P499 406 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 DHRS4L2Q6PKH6 230 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 KLHL24Q6TFL4 600 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM108Q6UXF1 575 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 DLEU7Q6UYE1 221 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 SSX8Q7RTT4 187 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 ARMC8Q8IUR7 673 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 ZIC4Q8N9L1 334 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 POMGNT2Q8NAT1 580 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 C11orf65Q8NCR3 313 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 HIPK4Q8NE63 616 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 IGFBPL1Q8WX77 278 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 TRMT61AQ96FX7 289 aaKnown RBP9.17□□□□□ -0.94
CAPN1-225ENST00000533704 RADILQ96JH8 1075 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 COX4I2Q96KJ9 171 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 MUS81Q96NY9 551 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 ALKBH3Q96Q83 286 aaPredicted RBP9.17□□□□□ -0.94
CAPN1-225ENST00000533704 RSPO3Q9BXY4 272 aaPredicted RBP9.17□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF701Q9NV72 531 aaPredicted RBP9.17□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM45AQ9NWC5 275 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 SEC14L4Q9UDX3 406 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 RASD1Q9Y272 281 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 ZFHX3Q15911 3703 aa9.17□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF587BE7ETH6 402 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 M0R3H8 397 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 PDLIM1O00151 329 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 TMCC2O75069 709 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 NPIPB7O75200 414 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 VAMP5O95183 116 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 LGI1O95970 557 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 OPN1SWP03999 348 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 DANCRP0C864 163 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 ZNF43P17038 809 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 GPX2P18283 190 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 PTAFRP25105 342 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 CD40P25942 277 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 P2RY4P51582 365 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 CLDN17P56750 224 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 PRPS1P60891 318 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 SLC25A3Q00325 362 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 EGR4Q05215 589 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 DMTNQ08495 405 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 C1DQ13901 141 aaKnown RBP9.16□□□□□ -0.94
CAPN1-225ENST00000533704 ADRM1Q16186 407 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 CLEC12BQ2HXU8 276 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 PGGHGQ32M88 737 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 HIKESHIQ53FT3 197 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 CREB3L2Q70SY1 520 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 ABHD12BQ7Z5M8 362 aaPredicted RBP9.16□□□□□ -0.94
CAPN1-225ENST00000533704 RETREG3Q86VR2 466 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 EPHX4Q8IUS5 362 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 DEPDC4Q8N2C3 294 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 C10orf53Q8N6V4 93 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 WDR31Q8NA23 367 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 SMYD1Q8NB12 490 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 MFSD8Q8NHS3 518 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 DNAJA4Q8WW22 397 aaPredicted RBP9.16□□□□□ -0.94
CAPN1-225ENST00000533704 SLC38A4Q969I6 547 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 TAAR8Q969N4 342 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 SLC35B4Q969S0 331 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 SLC47A1Q96FL8 570 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 POM121Q96HA1 1249 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 HS6ST2Q96MM7 605 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 ANKRD27Q96NW4 1050 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 CGREF1Q99674 301 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 PTDSS2Q9BVG9 487 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM120AQ9BXJ8 343 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 PIF1Q9H611 641 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM38AQ9H6F2 299 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 TMEM27Q9HBJ8 222 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 SLC17A5Q9NRA2 495 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 FAIMQ9NVQ4 179 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 TESQ9UGI8 421 aaKnown RBP9.16□□□□□ -0.94
CAPN1-225ENST00000533704 MGAT4BQ9UQ53 548 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 AMDHD2Q9Y303 409 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 ATP23Q9Y6H3 246 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 ARFGEF3Q5TH69 2177 aa9.16□□□□□ -0.94
CAPN1-225ENST00000533704 HIVEP2P31629 2446 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 ABCA2Q9BZC7 2435 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 FN1P02751 2386 aaKnown RBP9.15□□□□□ -0.94
CAPN1-225ENST00000533704 ABCA1O95477 2261 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 IGKV1D-42A0A075B6H8 117 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 TRAV36DV7A0A075B6V5 113 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 FAM171A2A8MVW0 826 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 FTCDNL1E5RQL4 147 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 E7EQL1 145 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 M0R082 166 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 AIM2O14862 343 aa9.15□□□□□ -0.94
CAPN1-225ENST00000533704 NDUFS7O75251 213 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms