RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 BTN3A2P78410 334 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CBX3Q13185 183 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 GINS1Q14691 196 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 SPHARQ15513 63 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 TMEM35AQ53FP2 167 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ZMAT1Q5H9K5 638 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 OR2G6Q5TZ20 316 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 LIPKQ5VXJ0 399 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CASP12Q6UXS9 341 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 FAM109AQ8N4B1 249 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 NATD1Q8N6N6 113 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 SLC16A11Q8NCK7 471 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 KBTBD8Q8NFY9 601 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 OR7G2Q8NG99 324 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 OR52I1Q8NGK6 324 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ELP4Q96EB1 424 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 C18orf12Q96KH6 178 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 LRR1Q96L50 414 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CNPPD1Q9BV87 410 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 FNDC11Q9BVV2 318 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 TTTY12Q9BZ98 90 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 BCL2L10Q9HD36 194 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CCDC59Q9P031 241 aaKnown RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 IL20RAQ9UHF4 553 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ZNF223Q9UK11 482 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 SYT5O00445 386 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 MPZL2O60487 215 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ATP6V1G1O75348 118 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ZFAND5O76080 213 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CNR1P21554 472 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 PPP2R1BP30154 601 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ADH7P40394 386 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 PCYT1AP49585 367 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 KHKP50053 298 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CDK5Q00535 292 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 DAZAP2Q15038 168 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 DEFB113Q30KQ7 82 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CLEC12AQ5QGZ9 265 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 C1orf94Q6P1W5 598 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 TMEM64Q6YI46 380 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 SPATC1Q76KD6 591 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 NKAIN4Q8IVV8 208 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 NANOGP1Q8N7R0 232 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 NUP43Q8NFH3 380 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 OR8J1Q8NGP2 316 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ASB15Q8WXK1 588 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 DIO2Q92813 273 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 TMEM203Q969S6 136 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 LRRC46Q96FV0 321 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 TMEM80Q96HE8 168 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 PRRC1Q96M27 445 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ZNF582Q96NG8 517 aaPredicted RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 FAM173AQ9BQD7 235 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 FAIM2Q9BWQ8 316 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 RERGLQ9H628 205 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 EXOSC4Q9NPD3 245 aaKnown RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 C14orf119Q9NWQ9 140 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 HPF1Q9NWY4 346 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 ERVK13-1Q9NX77 482 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 GIN1Q9NXP7 522 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 CRIM1Q9NZV1 1036 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 TESQ9UGI8 421 aaKnown RBP7.45□□□□□ -1.22
NEDD8-207ENST00000533242 MKLN1Q9UL63 735 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 LIPGQ9Y5X9 500 aa7.45□□□□□ -1.22
NEDD8-207ENST00000533242 DNAJC13O75165 2243 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 URADA6NGE7 173 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SUSD5O60279 629 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 PIP5K1CO60331 668 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CLEC2LP0C7M8 214 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 DDX5P17844 614 aaKnown RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 AHRP35869 848 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 GPR143P51810 404 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ID2Q02363 134 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 HYAL4Q2M3T9 481 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ZNF311Q5JNZ3 666 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CCNJQ5T5M9 372 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 RTL4Q6ZR62 310 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CCDC190Q86UF4 302 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 KRT73Q86Y46 540 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 PHC2Q8IXK0 858 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CA13Q8N1Q1 262 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 TMEM251Q8N6I4 163 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 POC5Q8NA72 575 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SYT14Q8NB59 555 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 TTLQ8NG68 377 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 BBS10Q8TAM1 723 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SARAFQ96BY9 339 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SLC35A4Q96G79 324 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 MS4A3Q96HJ5 214 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 FAM46AQ96IP4 442 aaKnown RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 TRNT1Q96Q11 434 aaKnown RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 DCLRE1CQ96SD1 692 aaKnown RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ASPNQ9BXN1 380 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 POLR2J2Q9GZM3 115 aaKnown RBP7.44□□□□□ -1.22
NEDD8-207ENST00000533242 TPK1Q9H3S4 243 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ENOPH1Q9UHY7 261 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 ZNF229Q9UJW7 825 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 CBLCQ9ULV8 474 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 SLC9A8Q9Y2E8 581 aa7.44□□□□□ -1.22
NEDD8-207ENST00000533242 A0A0G2JMM0 328 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms