RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 OFCC1Q8IZS5 231 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 OR10H4Q8NGA5 316 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 OR52I1Q8NGK6 324 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 RHOXF1Q8NHV9 184 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 AGR3Q8TD06 166 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 CMTM7Q96FZ5 175 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 PLEKHF1Q96S99 279 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 UBXN6Q9BZV1 441 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 C20orf85Q9H1P6 137 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 RNF167Q9H6Y7 350 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 EXO5Q9H790 373 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 FOLH1BQ9HBA9 442 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 NEK6Q9HC98 313 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 DDX18Q9NVP1 670 aaKnown RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 TMEM9Q9P0T7 183 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 ABCD2Q9UBJ2 740 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 KIF25Q9UIL4 384 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 TMCO1Q9UM00 188 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 STARD10Q9Y365 291 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 CAB39Q9Y376 341 aaPredicted RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 UGT2A1Q9Y4X1 527 aa2.18□□□□□ -2.06
CD44-234ENST00000531873 TET2Q6N021 2002 aaPredicted RBP2.18□□□□□ -2.06
CD44-234ENST00000531873 TTC21BQ7Z4L5 1316 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 SH3TC1Q8TE82 1336 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 IGHV3OR16-13A0A075B7E8 117 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 KIR2DL5BA0A0G2JN68 375 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 KIR2DL5BA0A0G2JPC4 375 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 KLF18A0A0U1RQI7 1052 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 FAM168BA1KXE4 195 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 DLGAP1O14490 977 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 TBL1XO60907 577 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 WBP4O75554 376 aaKnown RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 TSPAN13O95857 204 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 TIMP1P01033 207 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 SERPIND1P05546 499 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 UBTFL1P0CB47 393 aaPredicted RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 TROVE2P10155 538 aaKnown RBP eCLIP2.17□□□□□ -2.06
CD44-234ENST00000531873 GZMAP12544 262 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ATP6V1B2P21281 511 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 CXCR2P25025 360 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 CHMLP26374 656 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ANXA13P27216 316 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 NTSP30990 170 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 RFC4P35249 363 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 YAP1P46937 504 aaKnown RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 OR3A4PP47883 348 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ACLYP53396 1101 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 DSCR10P59022 87 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 RPS15P62841 145 aaKnown RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 KCNJ2P63252 427 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 IRX3P78415 501 aaPredicted RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 GNMTQ14749 295 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 PARP15Q460N3 678 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 MARC1Q5VT66 337 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 RAET1LQ5VY80 246 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 C11orf71Q6IPW1 123 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 HSDL2Q6YN16 418 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 DNM1P46Q6ZS02 220 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 UTS2BQ765I0 119 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ARCQ7LC44 396 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 FAM220AQ7Z4H9 259 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 SLC26A11Q86WA9 606 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ERI1Q8IV48 349 aaKnown RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 KIR2DL5AQ8N109 375 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 SLC39A11Q8N1S5 342 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 FTMTQ8N4E7 242 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 CD177Q8N6Q3 437 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ACOT4Q8N9L9 421 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 CCDC148Q8NFR7 591 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 KIR2DL5BQ8NHK3 375 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 PLPPR1Q8TBJ4 325 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ZNF564Q8TBZ8 553 aaPredicted RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 BRSK1Q8TDC3 778 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 NEIL2Q969S2 332 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 MS4A4EQ96PG1 132 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ANP32EQ9BTT0 268 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ILKAPQ9H0C8 392 aaPredicted RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 TMEM185BQ9H7F4 350 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 LY9Q9HBG7 655 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 CRLF2Q9HC73 371 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ZNF160Q9HCG1 818 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 ZNF275Q9NSD4 429 aaPredicted RBP2.17□□□□□ -2.06
CD44-234ENST00000531873 VNN3Q9NY84 501 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 DCDC2Q9UHG0 476 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 KIAA1257Q9ULG3 409 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 V9GY05 133 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 TTC41PQ6P2S7 1318 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 PHLPP2Q6ZVD8 1323 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 WDR19Q8NEZ3 1342 aa2.17□□□□□ -2.06
CD44-234ENST00000531873 TDRD6O60522 2096 aaKnown RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 PIKFYVEQ9Y2I7 2098 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 NSG1A0A0A6YYJ2 146 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 A0A0G2JLM5 398 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 A6NIZ1 184 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 C9JVG2 144 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 HIP1O00291 1037 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 PSTPIP1O43586 416 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 TOM1O60784 492 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 DNAJB6O75190 326 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms