RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ZBTB18Q99592 522 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 VRK1Q99986 396 aaPredicted RBP18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 TMEM45AQ9NWC5 275 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 TMEM160Q9NX00 188 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 CHST2Q9Y4C5 530 aa18.07■□□□□ 0.48
TSPAN4-219ENST00000530404 DSPPQ9NZW4 1301 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 VWC2LB2RUY7 222 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 ZNF587BE7ETH6 402 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 UPK3AO75631 287 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 KRT75O95678 551 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 NCF2P19878 526 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 TXNL4AP83876 142 aaKnown RBP18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 KRTAP24-1Q3LI83 254 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 CEP85LQ5SZL2 805 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 C1orf140Q5VVS0 124 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 PRAMEF8Q5VWM4 474 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 PRAMEF7Q5VXH5 474 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 NXNQ6DKJ4 435 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 SERPINA11Q86U17 422 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 KIRREL3Q8IZU9 778 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 KDM8Q8N371 416 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 KCNS3Q9BQ31 491 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 PIMREGQ9BSJ6 248 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 PRR14Q9BWN1 585 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 FKBP7Q9Y680 259 aa18.06■□□□□ 0.48
TSPAN4-219ENST00000530404 A8MVM7 634 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 ANP32DO95626 131 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 CALCRP30988 508 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 DSTNP60981 165 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 COPZ1P61923 177 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 SNRPD2P62316 118 aaKnown RBP18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 HOXC5Q00444 222 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 ATG16L1Q676U5 607 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 SLC46A3Q7Z3Q1 461 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 ABHD12BQ7Z5M8 362 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 EPHX4Q8IUS5 362 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 SLC38A5Q8WUX1 472 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 BCL2L2Q92843 193 aaPredicted RBP18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 SLC25A36Q96CQ1 311 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 FOXN4Q96NZ1 517 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 NELFAQ9H3P2 528 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 CA10Q9NS85 328 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 LPAR3Q9UBY5 353 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 SEC14L4Q9UDX3 406 aa18.05■□□□□ 0.48
TSPAN4-219ENST00000530404 IGHV4-61A0A0C4DH41 118 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 CECR9P0C854 216 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 SERPINF1P36955 418 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 NR4A2P43354 598 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 GZMKP49863 264 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 CRISP3P54108 245 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 UBE2NP61088 152 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 LRRC74AQ0VAA2 488 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 TNFAIP8L3Q5GJ75 292 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 HHATQ5VTY9 493 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 MYPOPQ86VE0 399 aaPredicted RBP18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 MGARPQ8TDB4 240 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 VPS33AQ96AX1 596 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 MSI2Q96DH6 328 aaKnown RBP18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 TMEM19Q96HH6 336 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 KCNS2Q9ULS6 477 aa18.04■□□□□ 0.48
TSPAN4-219ENST00000530404 LOC100289279A0A1B0GTE1 492 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 TMEM229AB2RXF0 380 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 HDAC3O15379 428 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 CRYAAP02489 173 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 CELA3BP08861 270 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 TFPTP0C1Z6 253 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 APEHP13798 732 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 RPS5P46782 204 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 WDR4P57081 412 aaKnown RBP18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 NAAAQ02083 359 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 ADIPOQQ15848 244 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 SLC9B1Q4ZJI4 515 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 RNF220Q5VTB9 566 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 FAM166AQ6J272 317 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 GLB1L3Q8NCI6 653 aaPredicted RBP18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 BOD1Q96IK1 185 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 KATNB1Q9BVA0 655 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 PARD6BQ9BYG5 372 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 PIF1Q9H611 641 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 TPT1P8Q9HAU6 139 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 OBP2BQ9NPH6 170 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 CALML5Q9NZT1 146 aa18.03■□□□□ 0.48
TSPAN4-219ENST00000530404 TRPC5OSA6NMA1 111 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 NPIPB7O75200 414 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 SLC22A3O75751 556 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 IL6P05231 212 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 NUDT7P0C024 238 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 OR4A8P0C604 315 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 PNMTP11086 282 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 SRD5A1P18405 259 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 CLDN17P56750 224 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 ROR2Q01974 943 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 LARS2Q15031 903 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 IQCCQ4KMZ1 466 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 PDCD4Q53EL6 469 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 ANKRD16Q6P6B7 361 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 OR9I1Q8NGQ6 314 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 SOX7Q9BT81 388 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 PTDSS2Q9BVG9 487 aa18.02■□□□□ 0.48
TSPAN4-219ENST00000530404 SPATA9Q9BWV2 254 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms