RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 RGNQ15493 299 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 GOLGA6L1Q8N7Z2 621 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 BBS10Q8TAM1 723 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 GTF2H4Q92759 462 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 SLC35B4Q969S0 331 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 BCL2L10Q9HD36 194 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 YAE1D1Q9NRH1 226 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 TMEM45AQ9NWC5 275 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 PCDHB14Q9Y5E9 798 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 USH1CQ9Y6N9 552 aa18.29■□□□□ 0.52
SMPD1-204ENST00000530395 IGHV4-30-2A0A087WSY4 118 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 TMEM229AB2RXF0 380 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 CLIC1O00299 241 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 POLR3GO15318 223 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-204ENST00000530395 NPIPB7O75200 414 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 PAX7P23759 505 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 APOBEC3AP31941 199 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-204ENST00000530395 HIKESHIQ53FT3 197 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 SLC2A7Q6PXP3 512 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 EPGNQ6UW88 154 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 CREB3L2Q70SY1 520 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 KCNS3Q9BQ31 491 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 PAIP1Q9H074 479 aaKnown RBP18.28■□□□□ 0.52
SMPD1-204ENST00000530395 RPS6KB2Q9UBS0 482 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 CHST2Q9Y4C5 530 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 PMF1-BGLAPU3KQ54 211 aa18.28■□□□□ 0.52
SMPD1-204ENST00000530395 ELOA3DA6NLF2 546 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-204ENST00000530395 ATP6V1G2-DDX39BF2Z307 99 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 NUDT7P0C024 238 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 BMP2P12643 396 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 SELENOPP49908 381 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 P2RY4P51582 365 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 ELOA3BQ3SY89 546 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 NIPAL3Q6P499 406 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 ELOA3Q8NG57 546 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 OR10H5Q8NGA6 315 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 OR1K1Q8NGR3 316 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 MFSD8Q8NHS3 518 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 MAL2Q969L2 176 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 BOD1Q96IK1 185 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 ALKBH3Q96Q83 286 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-204ENST00000530395 MDFIQ99750 246 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 TCF7L2Q9NQB0 619 aa18.27■□□□□ 0.52
SMPD1-204ENST00000530395 LGI1O95970 557 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 CSF3P09919 207 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 SLC25A16P16260 332 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 UBE2NP61088 152 aaKnown RBP18.26■□□□□ 0.51
SMPD1-204ENST00000530395 TBRG1Q3YBR2 411 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 EPHX4Q8IUS5 362 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 HTRA1Q92743 480 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 SLC25A36Q96CQ1 311 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 C7orf26Q96N11 449 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 ZNF317Q96PQ6 595 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-204ENST00000530395 MOV10Q9HCE1 1003 aaKnown RBP18.26■□□□□ 0.51
SMPD1-204ENST00000530395 MOKQ9UQ07 419 aa18.26■□□□□ 0.51
SMPD1-204ENST00000530395 FBN1P35555 2871 aaKnown RBP18.26■□□□□ 0.51
SMPD1-204ENST00000530395 TGDSO95455 350 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 PNMTP11086 282 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 ETS2P15036 469 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 PRKAR1BP31321 381 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 RPS5P46782 204 aaKnown RBP18.25■□□□□ 0.51
SMPD1-204ENST00000530395 MRPL19P49406 292 aaKnown RBP18.25■□□□□ 0.51
SMPD1-204ENST00000530395 EFNA4P52798 201 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 SH3BGRP55822 239 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-204ENST00000530395 HMBOX1Q6NT76 420 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 C5orf46Q6UWT4 87 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 ZNF525Q8N782 197 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 FAM168AQ92567 244 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 SLC38A2Q96QD8 506 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 LINC00470Q9BZP3 86 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 C12orf10Q9HB07 376 aa18.25■□□□□ 0.51
SMPD1-204ENST00000530395 ARFGEF3Q5TH69 2177 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 A8MV72 311 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-204ENST00000530395 FTCDNL1E5RQL4 147 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 ZNF43P17038 809 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 HOXB9P17482 250 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-204ENST00000530395 PPIBP23284 216 aaKnown RBP18.24■□□□□ 0.51
SMPD1-204ENST00000530395 HOXC5Q00444 222 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 BEND6Q5SZJ8 279 aaPredicted RBP18.24■□□□□ 0.51
SMPD1-204ENST00000530395 GCNT6Q5T4J0 391 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 C6orf89Q6UWU4 347 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 KRT73Q86Y46 540 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 LRRC8CQ8TDW0 803 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 FBXO17Q96EF6 278 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 TNFRSF13CQ96RJ3 184 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 KATNB1Q9BVA0 655 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 PTDSS2Q9BVG9 487 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 SPATA5L1Q9BVQ7 753 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 RCE1Q9Y256 329 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 FKBP7Q9Y680 259 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 RTTNQ86VV8 2226 aa18.24■□□□□ 0.51
SMPD1-204ENST00000530395 CUBNO60494 3623 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 IGHV1-18A0A0C4DH31 117 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 NR5A2O00482 541 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 AIM2O14862 343 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 OR2T1O43869 369 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 IFNA2P01563 188 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 CRYAAP02489 173 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 ARAFP10398 606 aa18.23■□□□□ 0.51
SMPD1-204ENST00000530395 CLDN17P56750 224 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms