RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 TMEM164Q5U3C3 297 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 PRAMEF9Q5VWM5 478 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 OGFOD3Q6PK18 319 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 RHOUQ7L0Q8 258 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 KIAA0907Q7Z7F0 614 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 LRRTM3Q86VH5 581 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SGK3Q96BR1 496 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SLC41A2Q96JW4 573 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 NUDT22Q9BRQ3 303 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 NIPSNAP3BQ9BS92 247 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ULBP3Q9BZM4 244 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 LIN7BQ9HAP6 207 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 PDE7BQ9NP56 450 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 PLEK2Q9NYT0 353 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 FBXO7Q9Y3I1 522 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 FOLR1P15328 257 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 MTNR1BP49286 362 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ERVK-16P61578 105 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SIRPAP78324 504 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 TSPAN31Q12999 210 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 GPM6BQ13491 265 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 EXOSC2Q13868 293 aaKnown RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ARHGAP19Q14CB8 494 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 HMGN3Q15651 99 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 C4orf17Q53FE4 359 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 TMEM244Q5VVB8 128 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 CD276Q5ZPR3 534 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 OR51D1Q8NGF3 324 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SPTSSAQ969W0 71 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SORCS2Q96PQ0 1159 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 NME2P1O60361 137 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 UGDHO60701 494 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 KLF8O95600 359 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ELK1P19419 428 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ARNTP27540 789 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF140P52738 457 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF74Q16587 644 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 LRRC56Q8IYG6 542 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 AVL9Q8NBF6 648 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 OR52R1Q8NGF1 315 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 OR51S1Q8NGJ8 323 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 TMEM106AQ96A25 262 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 TBC1D20Q96BZ9 403 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 KCTD12Q96CX2 325 aaKnown RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 AMBRA1Q9C0C7 1298 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SLC6A20Q9NP91 592 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 INPP5EQ9NRR6 644 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SEMA4GQ9NTN9 838 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SLC6A14Q9UN76 642 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 CITO14578 2027 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF623O75123 536 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 FGF18O76093 207 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 KCNK5O95279 499 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 RAF1P04049 648 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SELENOVP59797 346 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 FAAP20Q6NZ36 180 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 PAQR6Q6TCH4 344 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 TMEM25Q86YD3 366 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SLC38A5Q8WUX1 472 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 TAAR8Q969N4 342 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 RAB39BQ96DA2 213 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 TNFRSF13CQ96RJ3 184 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 PELI2Q9HAT8 420 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 NCDNQ9UBB6 729 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 DIMT1Q9UNQ2 313 aaKnown RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 D6RAR5 112 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SLC16A6O15403 523 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 NPY4RP50391 375 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 CTSCP53634 463 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 HCCSP53701 268 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 UBE2IP63279 158 aaKnown RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 GBX1Q14549 363 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 BAK1Q16611 211 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 FAM74A1Q5RGS3 127 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 CLEC9AQ6UXN8 241 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SHISA6Q6ZSJ9 500 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 Q6ZSR9 355 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ESPNLQ6ZVH7 1005 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SCD5Q86SK9 330 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 NECAP1Q8NC96 275 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 RSPRY1Q96DX4 576 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 CMSS1Q9BQ75 279 aaKnown RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 C16orf70Q9BSU1 422 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 SELENOIQ9C0D9 397 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF629Q9UEG4 869 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 ZNF230Q9UIE0 474 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-223ENST00000529986 FLVCR2Q9UPI3 526 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 INSL6Q9Y581 213 aa7.1□□□□□ -1.27
CTNND1-223ENST00000529986 CDC14CA4D256 554 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 FAM221BA6H8Z2 402 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 OR2C1O95371 312 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 SOD2P04179 222 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 NME1P15531 152 aaKnown RBP7.09□□□□□ -1.27
CTNND1-223ENST00000529986 HTR2CP28335 458 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 CD80P33681 288 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 RGRP47804 291 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 CLDN2P57739 230 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 ISL1P61371 349 aa7.09□□□□□ -1.27
CTNND1-223ENST00000529986 IAH1Q2TAA2 248 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-223ENST00000529986 MARCH8Q5T0T0 291 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms