RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 GIPP09681 153 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-218ENST00000528232 GPX2P18283 190 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 DAP3P51398 398 aaKnown RBP6.71□□□□□ -1.33
CTNND1-218ENST00000528232 SMUG1Q53HV7 270 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 RNASE10Q5GAN6 216 aaKnown RBP6.71□□□□□ -1.33
CTNND1-218ENST00000528232 TMEM31Q5JXX7 168 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 CARD17Q5XLA6 110 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 FCRLBQ6BAA4 426 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 H3F3CQ6NXT2 135 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 DLEU7Q6UYE1 221 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 USP53Q70EK8 1073 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 TIPARPQ7Z3E1 657 aaKnown RBP6.71□□□□□ -1.33
CTNND1-218ENST00000528232 LIMS2Q7Z4I7 341 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 NLRP8Q86W28 1048 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 UEVLDQ8IX04 471 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 SLC38A5Q8WUX1 472 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 MITD1Q8WV92 249 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 HRASLS5Q96KN8 279 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 LPAR4Q99677 370 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 C2orf42Q9NWW7 574 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 SRPK3Q9UPE1 567 aa6.71□□□□□ -1.33
CTNND1-218ENST00000528232 SLC5A10A0PJK1 596 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 SLC9B1P1A6NJY1 282 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 GJE1A6NN92 205 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 GFYI3L273 518 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 HOXB1P14653 301 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 PTAFRP25105 342 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 HSD11B2P80365 405 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 MAT1AQ00266 395 aaKnown RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 RPL22L1Q6P5R6 122 aaKnown RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 Q6ZNB5 142 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 PIWIL3Q7Z3Z3 882 aaKnown RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 ZNF546Q86UE3 836 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 NAA40Q86UY6 237 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 LIX1LQ8IVB5 337 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 FAM217AQ8IXS0 508 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 OR4C5Q8NGB2 326 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 OR56B2PQ8NGI1 322 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 LINC01599Q8WXQ3 324 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 TMEM18Q96B42 140 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 FOXRED1Q96CU9 486 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 CCNL2Q96S94 520 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 PLEKHA3Q9HB20 300 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 STARD5Q9NSY2 213 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 COPS3Q9UNS2 423 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 IER3IP1Q9Y5U9 82 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 NPIPA5A0A0B4J1W7 369 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 TCAPO15273 167 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 GASTP01350 101 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 MAS1P04201 325 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 DCAF7P61962 342 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 DLX2Q07687 328 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 EXOSC7Q15024 291 aaKnown RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 NR0B2Q15466 257 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 HSF5Q4G112 596 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 WBP2NLQ6ICG8 309 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 LRFN4Q6PJG9 635 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 ZNF595Q8IYB9 648 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 ADPRHL1Q8NDY3 354 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 PAQR8Q8TEZ7 354 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 TCTN2Q96GX1 697 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 MSLNLQ96KJ4 702 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 TEX37Q96LM6 180 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 PKMYT1Q99640 499 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 DDX31Q9H8H2 851 aaKnown RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 FTSJ1Q9UET6 329 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 PSORS1C1Q9UIG5 152 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 ANKRD31Q8N7Z5 1873 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 LINC01553A4QN01 128 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 ANKRD28O15084 1053 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 LILRB5O75023 590 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 DIRAS3O95661 229 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 IL33O95760 270 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 SYPP08247 313 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 NPPBP16860 134 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 HOXB9P17482 250 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 XCR1P46094 333 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 LSSP48449 732 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 GZMKP49863 264 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 POLR2HP52434 150 aaKnown RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 PPA1Q15181 289 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 TP53I3Q53FA7 332 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 RAET1LQ5VY80 246 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 SLC6A19Q695T7 634 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 RABEPKQ7Z6M1 372 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 BRIX1Q8TDN6 353 aaKnown RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 RNF128Q8TEB7 428 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 SLC25A44Q96H78 314 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 OR1F2PQ96R84 312 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 CXorf36Q9H7Y0 433 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 VSX1Q9NZR4 365 aaPredicted RBP6.71□□□□□ -1.34
CTNND1-218ENST00000528232 GNG13Q9P2W3 67 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 SLC7A11Q9UPY5 501 aa6.71□□□□□ -1.34
CTNND1-218ENST00000528232 A0A0A6YYH2 397 aa6.7□□□□□ -1.34
CTNND1-218ENST00000528232 A6NJ64 397 aa6.7□□□□□ -1.34
CTNND1-218ENST00000528232 EEF1E1-BLOC1S5C9J1V9 151 aa6.7□□□□□ -1.34
CTNND1-218ENST00000528232 SRPX2O60687 465 aaPredicted RBP6.7□□□□□ -1.34
CTNND1-218ENST00000528232 RAB40ALP0C0E4 278 aa6.7□□□□□ -1.34
CTNND1-218ENST00000528232 CNR1P21554 472 aa6.7□□□□□ -1.34
CTNND1-218ENST00000528232 SLC6A12P48065 614 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms