RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 NPIPA5A0A0B4J1W7 369 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 LOC100506127A0A0U1RQW1 187 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 A0A1W2PRV1 198 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 XKRY2A2RUG3 117 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 TMEM247A6NEH6 219 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 C4orf47A7E2U8 309 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 NPIPA7E9PJI5 369 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 H0YIG0 161 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 J3QKU1 62 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 CLDN4O14493 209 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 TOX3O15405 576 aaPredicted RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 CLOCKO15516 846 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 FLRT2O43155 660 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SUV39H1O43463 412 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 TRIAP1O43715 76 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 PRKNO60260 465 aaPredicted RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 CTNSO60931 367 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SCRG1O75711 98 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 BMP10O95393 424 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 H6PDO95479 791 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 CLPTM1O96005 669 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 CST1P01037 141 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 IFNA16P05015 189 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ATP1B1P05026 303 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 FESP07332 822 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ALOX5P09917 674 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 TFPTP0C1Z6 253 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ZNF806P0C7X5 589 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SLC35E2P0CK97 266 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 NPIPA8P0DM63 369 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 FCGR1AP12314 374 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 CCL4P13236 92 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ZNF23P17027 643 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 S1PR1P21453 382 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 IL32P24001 234 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ACP1P24666 158 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 APOBEC3AP31941 199 aaPredicted RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 GRK5P34947 590 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 PSMB10P40306 273 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 CBX5P45973 191 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 YAP1P46937 504 aaKnown RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 OR1E2P47887 323 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 RFX3P48380 749 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 PCP4P48539 62 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ZNF81P51508 661 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 PDX1P52945 283 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 RAD23AP54725 363 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ARSFP54793 590 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 RPS7P62081 194 aaKnown RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 IGLV3-21P80748 117 aaPredicted RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 RHAGQ02094 409 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 TLE3Q04726 772 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 EPS8Q12929 822 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 RAPSNQ13702 412 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 NNATQ16517 81 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 DUSP7Q16829 419 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 GPAT3Q53EU6 434 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 OTUD3Q5T2D3 398 aaPredicted RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 CCNJQ5T5M9 372 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 LCN10Q6JVE6 187 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 MFSD12Q6NUT3 480 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 NIPAL1Q6NVV3 410 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 CDC73Q6P1J9 531 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 BHLHB9Q6PI77 547 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 TBPL2Q6SJ96 375 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 FRRS1Q6ZNA5 592 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ZNF704Q6ZNC4 412 aaPredicted RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 ZBTB49Q6ZSB9 765 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SHISA6Q6ZSJ9 500 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 LANCL3Q6ZV70 420 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 COX15Q7KZN9 410 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 C16orf62Q7Z3J2 963 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 TMEM179BQ7Z7N9 219 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 PATL1Q86TB9 770 aaKnown RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 NAXDQ8IW45 347 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SLC30A8Q8IWU4 369 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 HS3ST5Q8IZT8 346 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 LGI4Q8N135 537 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 EID3Q8N140 333 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 OR2L13Q8N349 312 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 CBR4Q8N4T8 237 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 COX18Q8N8Q8 333 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SLC38A9Q8NBW4 561 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SLC16A11Q8NCK7 471 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 CATSPER1Q8NEC5 780 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 GPR32P1Q8NGA4 272 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 OR52R1Q8NGF1 315 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 OR52E4Q8NGH9 312 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 OR6S1Q8NH40 331 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 VANGL1Q8TAA9 524 aaPredicted RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 SETD6Q8TBK2 473 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ENKURQ8TC29 256 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SPPL2AQ8TCT8 520 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 ZNF675Q8TD23 568 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 PIK3R3Q92569 461 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SLC9A6Q92581 669 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 RIT1Q92963 219 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 SLC35B4Q969S0 331 aa3.81□□□□□ -1.8
CD44-226ENST00000527889 DACT3Q96B18 629 aaPredicted RBP3.81□□□□□ -1.8
CD44-226ENST00000527889 SPACA9Q96E40 222 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms