RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 C12orf73Q69YU5 71 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR8G2PQ6IF36 304 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR6B2Q6IFH4 312 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ADAM5Q6NVV9 412 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF529Q6P280 563 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 UBE2R2Q712K3 238 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 NDUFAF7Q7L592 441 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 LINGO2Q7L985 606 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SSX7Q7RTT5 188 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 GOLGA7Q7Z5G4 137 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SPRED2Q7Z698 418 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF546Q86UE3 836 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 VRK2Q86Y07 508 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 MMP21Q8N119 569 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 FBXO39Q8N4B4 442 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ACBD7Q8N6N7 88 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ARIH2OSQ8N7S6 290 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SAMD12Q8N8I0 201 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 LMNTD1Q8N9Z9 388 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 AQP11Q8NBQ7 271 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR2AK2Q8NG84 335 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR4F15Q8NGB8 312 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR4K2Q8NGD2 314 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR51S1Q8NGJ8 323 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR52I1Q8NGK6 324 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR4A4PQ8NGN8 299 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 HAVCR2Q8TDQ0 301 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 THAP3Q8WTV1 239 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 C15orf40Q8WUR7 153 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 NUDCD2Q8WVJ2 157 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 METTL21AQ8WXB1 218 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SORCS1Q8WY21 1168 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 RSC1A1Q92681 617 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 EXTL1Q92935 676 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF707Q96C28 371 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 MYEOVQ96EZ4 313 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SLC41A3Q96GZ6 507 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SCLYQ96I15 445 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF845Q96IR2 970 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 HSPA12BQ96MM6 686 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 F2RL3Q96RI0 385 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ABHD1Q96SE0 405 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF382Q96SR6 550 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CNN2Q99439 309 aaKnown RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 MRPL45Q9BRJ2 306 aaKnown RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 URM1Q9BTM9 101 aaKnown RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF471Q9BX82 626 aaPredicted RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 POTEKPQ9BYX7 375 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 DPY30Q9C005 99 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 LAT2Q9GZY6 243 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ZNF700Q9H0M5 742 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR10A4Q9H209 315 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SMOC1Q9H4F8 434 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 ACTL8Q9H568 366 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 IKZF5Q9H5V7 419 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CLMPQ9H6B4 373 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 TMEM185BQ9H7F4 350 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 BEX1Q9HBH7 125 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 NOX3Q9HBY0 568 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 HRASLSQ9HDD0 168 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-225ENST00000527326 ADARB2Q9NS39 739 aaKnown RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 MRPS18AQ9NVS2 196 aaKnown RBP5.36□□□□□ -1.55
CD44-225ENST00000527326 NKIRAS2Q9NYR9 191 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 PRODH2Q9UF12 536 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 OR14J1Q9UGF5 321 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CACFD1Q9UGQ2 172 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 IL17BQ9UHF5 180 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 A4GNTQ9UNA3 340 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 FAM96BQ9Y3D0 163 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 SLCO1B1Q9Y6L6 691 aa5.36□□□□□ -1.55
CD44-225ENST00000527326 CHD5Q8TDI0 1954 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 GBF1Q92538 1859 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SLC5A10A0PJK1 596 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SMIM30A4D0T7 59 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 NKX6-3A6NJ46 265 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 UPK3BL1B0FP48 263 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 UPK3BL2E5RIL1 263 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 E7EQ34 232 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 ANHXE9PGG2 379 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 GOSR2O14653 212 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 RNF13O43567 381 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 TCF21O43680 179 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OR10H3O60404 316 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 OR1I1O60431 355 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SMPD2O60906 423 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 DIRAS1O95057 198 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 NDUFB6O95139 128 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 PNPP00491 289 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 CD8AP01732 235 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 LRG1P02750 347 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 RLN1P04808 185 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 CD5P06127 495 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 SLC35G4P0C7Q5 338 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 HOXB9P17482 250 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 TBPP20226 339 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 DRD5P21918 477 aa5.35□□□□□ -1.55
CD44-225ENST00000527326 FAUP35544 74 aaKnown RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 CHI3L1P36222 383 aaPredicted RBP5.35□□□□□ -1.55
CD44-225ENST00000527326 DHPSP49366 369 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms