RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 KCNS3Q9BQ31 491 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 NAA11Q9BSU3 229 aaPredicted RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 TMEM120AQ9BXJ8 343 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 NMUR2Q9GZQ4 415 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 WDR55Q9H6Y2 383 aaPredicted RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 LPAR2Q9HBW0 351 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 EXD2Q9NVH0 621 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 PARPBPQ9NWS1 579 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 TMEFF2Q9UIK5 374 aaPredicted RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 DCTN4Q9UJW0 460 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 OSGIN1Q9UJX0 560 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 PCDHGB4Q9UN71 923 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 ARL2BPQ9Y2Y0 163 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 AMDHD2Q9Y303 409 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 WDR45Q9Y484 360 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 FLVCR1Q9Y5Y0 555 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 GPR45Q9Y5Y3 372 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 SPIN1Q9Y657 262 aaPredicted RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 FKBP7Q9Y680 259 aa5.73□□□□□ -1.49
CD44-221ENST00000526000 YLPM1P49750 1951 aaKnown RBP5.73□□□□□ -1.49
CD44-221ENST00000526000 LOC390937A0A1W2PQ73 354 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 DUXAA6NLW8 204 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 E9PBE3 544 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 PDLIM1O00151 329 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ETV2O00321 342 aaPredicted RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 ANKRD28O15084 1053 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 TCF21O43680 179 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SLC22A3O75751 556 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 DCTN3O75935 186 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SEC14L2O76054 403 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 VENTXO95231 258 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 PMS2P2O95744 297 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 WNT11O96014 354 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 IL6P05231 212 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 PGRP06401 933 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 CELA3BP08861 270 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ADRA2AP08913 450 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 CSF3P09919 207 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ALDOCP09972 364 aaKnown RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 GKN3PP0CG01 181 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 DAOP14920 347 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ZNF23P17027 643 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 APEX1P27695 318 aaKnown RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 MPGP29372 298 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 CALCRP30988 508 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 THBS4P35443 961 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 CHI3L1P36222 383 aaPredicted RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 SELENOPP49908 381 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SEC24CP53992 1094 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 UBE2NP61088 152 aaKnown RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 SLC35A1P78382 337 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 TXNL4AP83876 142 aaKnown RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 TGFBR3Q03167 851 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 PLAURQ03405 335 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 HGFACQ04756 655 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SLC17A1Q14916 467 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ADIPOQQ15848 244 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SYPL1Q16563 259 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 TBRG1Q3YBR2 411 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 COQ5Q5HYK3 327 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ATAD3BQ5T9A4 648 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 TMEM225Q6GV28 225 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 CGB2Q6NT52 195 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 BHLHB9Q6PI77 547 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 FRRS1Q6ZNA5 592 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 LINGO2Q7L985 606 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 GRINAQ7Z429 371 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 CADM2Q8N3J6 435 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SVOPLQ8N434 492 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 PSMA8Q8TAA3 256 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SFXN5Q8TD22 340 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SLC25A43Q8WUT9 341 aaPredicted RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 BCL2L2Q92843 193 aaPredicted RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 MOAP1Q96BY2 351 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 SLC25A36Q96CQ1 311 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ELAC2Q9BQ52 826 aaKnown RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 EBF4Q9BQW3 602 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ZNF350Q9GZX5 532 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ADAM19Q9H013 955 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 TPK1Q9H3S4 243 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 METTL17Q9H7H0 456 aaPredicted RBP5.72□□□□□ -1.49
CD44-221ENST00000526000 RMND5AQ9H871 391 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 RLIMQ9NVW2 624 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 ADPRHL2Q9NX46 363 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 MALT1Q9UDY8 824 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 HDGFL3Q9Y3E1 203 aa5.72□□□□□ -1.49
CD44-221ENST00000526000 PRSS51A0A1B0GVH4 220 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 OR6C65A6NJZ3 312 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 BBIP1A8MTZ0 92 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 B9A039 149 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 hCG_2039718K7EN88 272 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 RNASET2O00584 256 aaKnown RBP5.71□□□□□ -1.5
CD44-221ENST00000526000 NDUFAB1O14561 156 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 DNAJA2O60884 412 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 LILRA1O75019 489 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 UPK3AO75631 287 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 NPPAP01160 153 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 CRYAAP02489 173 aa5.71□□□□□ -1.5
CD44-221ENST00000526000 GSNP06396 782 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms