RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 LINGO2Q7L985 606 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 GPAT4Q86UL3 456 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 PTOV1Q86YD1 416 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 EPHX4Q8IUS5 362 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 KTI12Q96EK9 354 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-223ENST00000523125 BOD1Q96IK1 185 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 TAPBPLQ9BX59 468 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 C1QTNF6Q9BXI9 259 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 SLCO5A1Q9H2Y9 848 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 C12orf10Q9HB07 376 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 SLC17A5Q9NRA2 495 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 SEC14L4Q9UDX3 406 aa10.85□□□□□ -0.67
VEGFA-223ENST00000523125 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-223ENST00000523125 IGKV1D-42A0A075B6H8 117 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 A0A1B0GWA3 101 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 ELOA3DA6NLF2 546 aaPredicted RBP10.84□□□□□ -0.67
VEGFA-223ENST00000523125 FAM171A2A8MVW0 826 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 TPST2O60704 377 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 EDF1O60869 148 aaKnown RBP10.84□□□□□ -0.67
VEGFA-223ENST00000523125 NDUFS7O75251 213 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 VAMP5O95183 116 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 AHSA1O95433 338 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 PNMTP11086 282 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 PTNP21246 168 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 PTAFRP25105 342 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 SELENOPP49908 381 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 TNK1Q13470 666 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 SCARB2Q14108 478 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 ELOA3BQ3SY89 546 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 KLHL17Q6TDP4 642 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 B3GLCTQ6Y288 498 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 DNM1P46Q6ZS02 220 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 KRT73Q86Y46 540 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 PIAS4Q8N2W9 510 aaPredicted RBP10.84□□□□□ -0.67
VEGFA-223ENST00000523125 KDM8Q8N371 416 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 C17orf78Q8N4C9 275 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 DPP10Q8N608 796 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 POMGNT2Q8NAT1 580 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 ELOA3Q8NG57 546 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 SLC38A4Q969I6 547 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 TAAR8Q969N4 342 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 SLC25A36Q96CQ1 311 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 RADILQ96JH8 1075 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 RABEP2Q9H5N1 569 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 B3GAT1Q9P2W7 334 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 CORO2BQ9UQ03 480 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 MGAT4BQ9UQ53 548 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 RASD1Q9Y272 281 aa10.84□□□□□ -0.67
VEGFA-223ENST00000523125 CHD3Q12873 2000 aaKnown RBP10.84□□□□□ -0.67
VEGFA-223ENST00000523125 EVPLLA8MZ36 301 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 M0R1B8 84 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 ZNF432O94892 652 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 MFN2O95140 757 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 IGHV4-39P01824 125 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 SLC6A2P23975 617 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 AQP1P29972 269 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 PCBP3P57721 371 aaKnown RBP10.83□□□□□ -0.68
VEGFA-223ENST00000523125 TGFBR3Q03167 851 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 DMTNQ08495 405 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 SELPLGQ14242 412 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 HIKESHIQ53FT3 197 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 C11orf71Q6IPW1 123 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 SLC22A25Q6T423 547 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 HIPK4Q8NE63 616 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 DNAJA4Q8WW22 397 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-223ENST00000523125 GTPBP3Q969Y2 492 aaKnown RBP10.83□□□□□ -0.68
VEGFA-223ENST00000523125 TRMT61AQ96FX7 289 aaKnown RBP10.83□□□□□ -0.68
VEGFA-223ENST00000523125 ANKRD27Q96NW4 1050 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 SPATA5L1Q9BVQ7 753 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 NPHS2Q9NP85 383 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 RPS6KB2Q9UBS0 482 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 LEF1Q9UJU2 399 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-223ENST00000523125 GDF2Q9UK05 429 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-223ENST00000523125 B3GALT5Q9Y2C3 310 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 AMDHD2Q9Y303 409 aa10.83□□□□□ -0.68
VEGFA-223ENST00000523125 UPK3AO75631 287 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 LGI1O95970 557 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 CDH2P19022 906 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-223ENST00000523125 TTKP33981 857 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 ACVR1BP36896 505 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 KRTAP1-1Q07627 177 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 ETFDHQ16134 617 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 CLEC12BQ2HXU8 276 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 ALG10BQ5I7T1 473 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 C1QTNF12Q5T7M4 302 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 FAM69AQ5T7M9 428 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 FAM91A1Q658Y4 838 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 ULK3Q6PHR2 472 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 DHDDSQ86SQ9 333 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 ARMC8Q8IUR7 673 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 OR1K1Q8NGR3 316 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 TSPEARQ8WU66 669 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 BCL2L2Q92843 193 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-223ENST00000523125 OXGR1Q96P68 337 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 ZNF607Q96SK3 696 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 CGREF1Q99674 301 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 DHRS9Q9BPW9 319 aa10.82□□□□□ -0.68
VEGFA-223ENST00000523125 LINC00470Q9BZP3 86 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms