RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 RARRES3Q9UL19 164 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 DIMT1Q9UNQ2 313 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 MICAL3Q7RTP6 2002 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PTPRJQ12913 1337 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 NRCAMQ92823 1304 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PCNX3Q9H6A9 2034 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 BRCA1P38398 1863 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 A0A0U1RQS6 177 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 C1orf232A0A0U1RR37 186 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 RGSL1A5PLK6 1076 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR5H15A6NDH6 313 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 IGLON5A6NGN9 336 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ARHGAP42A6NI28 874 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAM159BA6NKW6 160 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNTNA6NMZ2 147 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SRRM4A7MD48 611 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ERI2A8K979 691 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CCRL2O00421 344 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CXCL11O14625 94 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF749O43361 778 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TXNL1O43396 289 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 PLIN3O60664 434 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CST8O60676 142 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 BANF1O75531 89 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC25A27O95847 323 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 PDGFBP01127 241 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 EPOP01588 193 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TNNC2P02585 160 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 MT-ND3P03897 115 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNRPAP09012 282 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 HOXD4P09016 255 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CT45A8P0DMV1 189 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CT45A9P0DMV2 189 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 MCF2P10911 925 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 RALBP11234 206 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 MLNP12872 115 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ETS1P14921 441 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 NELFEP18615 380 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TCN1P20061 433 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TPSB2P20231 275 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ME2P23368 584 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 DNAJB1P25685 340 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 MIPP30301 263 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 EPHX2P34913 555 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR1D2P34982 312 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 HMGCLP35914 325 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SERPINB9P50453 376 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ATP4BP51164 291 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 KIAA1024LP59773 190 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ESRRGP62508 458 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 S100A12P80511 92 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 LAMTOR4Q0VGL1 99 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 LCP2Q13094 533 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 BAMBIQ13145 260 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 NME3Q13232 169 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 PPIL2Q13356 520 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 PEX6Q13608 980 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 FLOT2Q14254 428 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 GNA13Q14344 377 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TPSAB1Q15661 275 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CHI3L2Q15782 390 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 STK11Q15831 433 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ATP6AP1Q15904 470 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF181Q2M3W8 571 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF674Q2M3X9 581 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ADPRMQ3LIE5 342 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 AARDQ4LEZ3 155 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CT45A2Q5DJT8 189 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TCTEX1D4Q5JR98 221 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CELF3Q5SZQ8 465 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 NXNL2Q5VZ03 156 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 STEAP4Q687X5 459 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CAPN13Q6MZZ7 669 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 DNAJC24Q6P3W2 148 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 DCUN1D2Q6PH85 259 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF600Q6ZNG1 722 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 GDPD3Q7L5L3 318 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TAS2R42Q7RTR8 314 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 BNIPLQ7Z465 357 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 LINC00523Q86TU6 105 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 P2RY8Q86VZ1 359 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SLC26A11Q86WA9 606 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SNX29P2Q8IUI4 249 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 PSTKQ8IV42 348 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 GVQW1Q8N7I0 195 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 SIDT2Q8NBJ9 832 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CSNK1G2-AS1Q8NCQ2 148 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRPV3Q8NET8 790 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR5H6Q8NGV6 325 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 GRPEL2Q8TAA5 225 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAM110BQ8TC76 370 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ACTL9Q8TC94 416 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 PHOSPHO2Q8TCD6 241 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 URGCPQ8TCY9 931 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CAPSLQ8WWF8 208 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 CCDC124Q96CT7 223 aaKnown RBP2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ASB9Q96DX5 294 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 YIPF6Q96EC8 236 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF560Q96MR9 790 aa2.63□□□□□ -1.99
HMGB1P41-201ENST00000520234 GLT1D1Q96MS3 346 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms