RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CDK3Q00526 305 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 CCINQ13939 588 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 HLXQ14774 488 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF750Q32MQ0 723 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 OR4D11Q8NGI4 311 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 FAM46BQ96A09 425 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 LINC00052Q96N35 136 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 HHIPQ96QV1 700 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 CMKLR1Q99788 373 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 NDRG3Q9UGV2 375 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 NTNG1Q9Y2I2 539 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 SF3B6Q9Y3B4 125 aaKnown RBP6.16□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF337Q9Y3M9 751 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 A0A0B4J293 547 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 OR2F2O95006 317 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 GIMD1P0DJR0 217 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 CPN1P15169 458 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 MAOBP27338 520 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 CD79BP40259 229 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 CTXN1P60606 82 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 OR2F1Q13607 317 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 AVPI1Q5T686 147 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 ARHGAP40Q5TG30 622 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 B3GNTL1Q67FW5 361 aaPredicted RBP6.16□□□□□ -1.42
CPNE3-203ENST00000517490 STEAP1BQ6NZ63 245 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 TMEM91Q6ZNR0 172 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 SLC16A11Q8NCK7 471 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 OR2AK2Q8NG84 335 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 OR13C5Q8NGS8 318 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 PFN4Q8NHR9 129 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 SLC6A18Q96N87 628 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 LMF1Q96S06 567 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 PDCD1LG2Q9BQ51 273 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 LUZP4Q9P127 313 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 STEAP1Q9UHE8 339 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 ZMIZ1Q9ULJ6 1067 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 OR1A2Q9Y585 309 aa6.16□□□□□ -1.42
CPNE3-203ENST00000517490 A0A1W2PR48 441 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 MEIS3P1A6NDR6 274 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 GGT3PA6NGU5 568 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 HMSDA8MTL9 139 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 NUDT19A8MXV4 375 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 PRSS44E7EML9 344 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SCGNO76038 276 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 FGF18O76093 207 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 RHOP08100 348 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 MGMTP16455 207 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 CDK2P24941 298 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 RIDAP52758 137 aaKnown RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 CRYBA2P53672 197 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 ERVK-21P61565 698 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 TNFRSF17Q02223 184 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 ARFRP1Q13795 201 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 LTB4RQ15722 352 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 MPEG1Q2M385 716 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 ARHGAP11BQ3KRB8 267 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 LAMTOR1Q6IAA8 161 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 FAM122BQ7Z309 247 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 ESX1Q8N693 406 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SLAIN1Q8ND83 568 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 PHOSPHO1Q8TCT1 267 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 DCUN1D4Q92564 292 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 FOXRED1Q96CU9 486 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SLC35A4Q96G79 324 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 HHIPL1Q96JK4 782 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 LINC00615Q96LM1 132 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 C10orf90Q96M02 699 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 HCAR1Q9BXC0 346 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 MTIF3Q9H2K0 278 aaKnown RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SLCO5A1Q9H2Y9 848 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 OR2S2Q9NQN1 319 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SIRT3Q9NTG7 399 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 CYB5R1Q9UHQ9 305 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 MOKQ9UQ07 419 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF175Q9Y473 711 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 RNF215Q9Y6U7 377 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 GOLGA4Q13439 2230 aaKnown RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 PRAMEF25A6NGN4 478 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 TMEM212A6NML5 194 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 FAM171A2A8MVW0 826 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SLC31A1O15431 190 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 LANCL1O43813 399 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 VNN2O95498 520 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 HLA-AP01891 365 aaKnown RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SPARCP09486 303 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 CTSEP14091 401 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 PGAM2P15259 253 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF20P17024 532 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 ITGA3P26006 1051 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 LUMP51884 338 aaPredicted RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 DUSP8Q13202 625 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 CBFBQ13951 182 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 HNRNPA1L2Q32P51 320 aaKnown RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SLC18B1Q6NT16 456 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 DPY19L2P2Q6ZN68 376 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 SYT9Q86SS6 491 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 ZNF101Q8IZC7 436 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 BOLLQ8N9W6 283 aaKnown RBP6.15□□□□□ -1.42
CPNE3-203ENST00000517490 OR52E1Q8NGJ3 308 aa6.15□□□□□ -1.42
CPNE3-203ENST00000517490 STK35Q8TDR2 534 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms