RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 ZNF443Q9Y2A4 671 aaPredicted RBP12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 GPR45Q9Y5Y3 372 aa12.74□□□□□ -0.37
SCARNA20.5-201ENST00000516991 VWC2LB2RUY7 222 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SLCO1B7G3V0H7 640 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 AHSA1O95433 338 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 BCHEP06276 602 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 GKN3PP0CG01 181 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZCCHC18P0CG32 403 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HOXB1P14653 301 aaPredicted RBP12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 IDO1P14902 403 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 NCF2P19878 526 aaPredicted RBP12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HNF1AP20823 631 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ACAA2P42765 397 aaKnown RBP12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 NR4A2P43354 598 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 P2RY4P51582 365 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 DSTNP60981 165 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PDCD4Q53EL6 469 aaKnown RBP12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HHATQ5VTY9 493 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 C1orf140Q5VVS0 124 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MSANTD1Q6ZTZ1 278 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CREB3L2Q70SY1 520 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 VRK2Q86Y07 508 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 FAM169BQ8N8A8 192 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 STK35Q8TDR2 534 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SORCS2Q96PQ0 1159 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ALKBH3Q96Q83 286 aaPredicted RBP12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 LINC00470Q9BZP3 86 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 RMND5AQ9H871 391 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CA10Q9NS85 328 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CRNNQ9UBG3 495 aaPredicted RBP12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZNF232Q9UNY5 417 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 RCE1Q9Y256 329 aa12.73□□□□□ -0.37
SCARNA20.5-201ENST00000516991 LOC390937A0A1W2PQ73 354 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TMEM229AB2RXF0 380 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 B9A039 149 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 KLF11O14901 512 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 NPIPB7O75200 414 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 LY6HO94772 140 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ANP32DO95626 131 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 LGI1O95970 557 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TFPTP0C1Z6 253 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 APEHP13798 732 aaKnown RBP12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ETFAP13804 333 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SRD5A1P18405 259 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 GTF2E2P29084 291 aaKnown RBP12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SERPINF1P36955 418 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CRATP43155 626 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PPOXP50336 477 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MVDP53602 400 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 BNIP2Q12982 314 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 GGTLC2Q14390 218 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MAPK11Q15759 364 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 EFNB3Q15768 340 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MST1LQ2TV78 715 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TNFAIP8L3Q5GJ75 292 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 NIPAL3Q6P499 406 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ANKRD16Q6P6B7 361 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZNF540Q8NDQ6 660 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ANKK1Q8NFD2 765 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 OR4F15Q8NGB8 312 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MFSD8Q8NHS3 518 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 BCL2L2Q92843 193 aaPredicted RBP12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SLC35B4Q969S0 331 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 PAIP2Q9BPZ3 127 aaKnown RBP12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SPATA9Q9BWV2 254 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CENPHQ9H3R5 247 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 THAP1Q9NVV9 213 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 IFT52Q9Y366 437 aa12.72□□□□□ -0.37
SCARNA20.5-201ENST00000516991 A0A0G2JPF8 293 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HNRNPCL2B2RXH8 293 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HNRNPCL3B7ZW38 293 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HNRNPCL1O60812 293 aaKnown RBP12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SLC22A3O75751 556 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 IGLV1-44P01699 117 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ERCC1P07992 297 aaPredicted RBP12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 HNRNPCL4P0DMR1 293 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 IGFBP5P24593 272 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 EPHA3P29320 983 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SELENOPP49908 381 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 NAAAQ02083 359 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 MPP2Q14168 576 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 CEP85LQ5SZL2 805 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 C5orf46Q6UWT4 87 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 SLC38A5Q8WUX1 472 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 C3orf49Q96BT1 292 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TMEM19Q96HH6 336 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ITCHQ96J02 903 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 RAD21L1Q9H4I0 556 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 WDR55Q9H6Y2 383 aaPredicted RBP12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 TPT1P8Q9HAU6 139 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
SCARNA20.5-201ENST00000516991 LOC100289279A0A1B0GTE1 492 aa12.7□□□□□ -0.38
SCARNA20.5-201ENST00000516991 VSTM5A8MXK1 200 aa12.7□□□□□ -0.38
SCARNA20.5-201ENST00000516991 AKAP8O43823 692 aaKnown RBP12.7□□□□□ -0.38
SCARNA20.5-201ENST00000516991 FZD7O75084 574 aa12.7□□□□□ -0.38
SCARNA20.5-201ENST00000516991 SLC43A1O75387 559 aa12.7□□□□□ -0.38
SCARNA20.5-201ENST00000516991 CECR9P0C854 216 aa12.7□□□□□ -0.38
SCARNA20.5-201ENST00000516991 PRG2P13727 222 aa12.7□□□□□ -0.38
SCARNA20.5-201ENST00000516991 ROR2Q01974 943 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms