RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CASC1Q6TDU7 716 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 ZNF571Q7Z3V5 609 aaPredicted RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 KIR2DL5AQ8N109 375 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 ZCCHC7Q8N3Z6 543 aaKnown RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 KIR2DL5BQ8NHK3 375 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 UFD1Q92890 307 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 ZNF799Q96GE5 643 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 RASL11BQ9BPW5 248 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 GON7Q9BXV9 100 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 ACTR6Q9GZN1 396 aa3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 NHEJ1Q9H9Q4 299 aaPredicted RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 ZNF331Q9NQX6 463 aaPredicted RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 C6orf203Q9P0P8 240 aaPredicted RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 PHF3Q92576 2039 aaKnown RBP3.35□□□□□ -1.87
HMGCS1-207ENST00000514610 IQANK1A0A1B0GTG1 560 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 GJE1A6NN92 205 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 A8MXQ7 604 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 LOC110117498-PIK3R3F6TDL0 507 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 TNFSF13O75888 250 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 IGHV4-34P06331 123 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 KLK3P07288 261 aaPredicted RBP3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 RCC1P18754 421 aaPredicted RBP3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 BTCP35070 178 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 OPRD1P41143 372 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 AIF1P55008 147 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 CDK16Q00536 496 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 GPNMBQ14956 572 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 NRF1Q16656 503 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 KLHL38Q2WGJ6 581 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 ZNF658BQ4V348 819 aaPredicted RBP3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 HSDL2Q6YN16 418 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 Q6ZVH6 145 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 TRIM69Q86WT6 500 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 MKXQ8IYA7 352 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 ZNF679Q8IYX0 411 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 LRRC75A-AS1Q8N1F1 130 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 RNF175Q8N4F7 328 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 OR6C4Q8NGE1 309 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 MAGEE2Q8TD90 523 aaPredicted RBP3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 C10orf35Q96D05 121 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 ITCHQ96J02 903 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 CLCC1Q96S66 551 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 PLGRKTQ9HBL7 147 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 MCCC2Q9HCC0 563 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 ZNF225Q9UK10 706 aa3.34□□□□□ -1.87
HMGCS1-207ENST00000514610 RBMY1BA6NDE4 496 aaKnown RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 RBMY1EA6NEQ0 496 aaKnown RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 TRIM49D1C9J1S8 452 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 AGPAT2O15120 278 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 SURF6O75683 361 aaKnown RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 KLF8O95600 359 aaPredicted RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 RBMY1DP0C7P1 496 aaKnown RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 RBMY1A1P0DJD3 496 aaKnown RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 DBTP11182 482 aaKnown RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 GPM6AP51674 278 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 LRRC23Q53EV4 343 aaPredicted RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 CENPPQ6IPU0 288 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 C1orf94Q6P1W5 598 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 Q6ZN92 141 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 TMEM61Q8N0U2 210 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 FAM71E2Q8N5Q1 922 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 OR8J1Q8NGP2 316 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 FANK1Q8TC84 345 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 FCRL1Q96LA6 429 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 ZNF285Q96NJ3 590 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 RPRD1AQ96P16 312 aaPredicted RBP3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 COPS8Q99627 209 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 NRIP2Q9BQI9 281 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 CLCF1Q9UBD9 225 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 TP53TG5Q9Y2B4 290 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 CDC42BPBQ9Y5S2 1711 aa3.33□□□□□ -1.88
HMGCS1-207ENST00000514610 A0A1W2PNU3 283 aaPredicted RBP3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 SNTNA6NMZ2 147 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 CXCL11O14625 94 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 TIMM8AO60220 97 aaPredicted RBP3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 PSG2P11465 335 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 ICAM2P13598 275 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 GLP1RP43220 463 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 RPS10P46783 165 aaKnown RBP3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 OR5I1Q13606 314 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 CAPRIN1Q14444 709 aaKnown RBP3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 ATP6AP1Q15904 470 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 FILIP1LQ4L180 1135 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 MARCH8Q5T0T0 291 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 ENPP6Q6UWR7 440 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 ZNF620Q6ZNG0 422 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 PAQR7Q86WK9 346 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 ECHDC2Q86YB7 292 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 CXorf40BQ96DE9 158 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 OR11A1Q9GZK7 315 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 NT5C3AQ9H0P0 336 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 CCL28Q9NRJ3 127 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 QPCTLQ9NXS2 382 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 KCNIP3Q9Y2W7 256 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 CACNG2Q9Y698 323 aa3.32□□□□□ -1.88
HMGCS1-207ENST00000514610 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
HMGCS1-207ENST00000514610 A0A1B0GUA9 196 aa3.31□□□□□ -1.88
HMGCS1-207ENST00000514610 FMO3P31513 532 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms