RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ZCCHC10Q8TBK6 192 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 SFXN1Q9H9B4 322 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 CERS4Q9HA82 394 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 AUP1Q9Y679 476 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 A0A1B0GUH1 482 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 MAN2B1O00754 1011 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 RAD1O60671 282 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 CDC123O75794 336 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 WDPCPO95876 746 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 IFNGP01579 166 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 GABRA1P14867 456 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 MPIP34949 423 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 UBE2IP63279 158 aaKnown RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 GXYLT1Q4G148 440 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 UBE2NLQ5JXB2 153 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 FBXO46Q6PJ61 603 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 GLDNQ6ZMI3 551 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 CDH26Q8IXH8 852 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 OR52E1Q8NGJ3 308 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 ATOH1Q92858 354 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 CDS1Q92903 461 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 NKD1Q969G9 470 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 HSPA12BQ96MM6 686 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 UBL7Q96S82 380 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 TIMM29Q9BSF4 260 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 C1QTNF2Q9BXJ5 285 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 REG4Q9BYZ8 158 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 FKRPQ9H9S5 495 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 SIDT1Q9NXL6 827 aaKnown RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 MBD2Q9UBB5 411 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 ALPK2Q86TB3 2170 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 RCBTB2O95199 551 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 F12P00748 615 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 SBK2P0C263 348 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 UGT2B7P16662 529 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 ITPKBP27987 946 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 CMPK1P30085 196 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 RPS21P63220 83 aaKnown RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 FIGNL1Q6PIW4 674 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 UNQ6126/PRO20091Q6UXV3 157 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 SSX6Q7RTT6 188 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 OVCH2Q7RTZ1 564 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 KRT77Q7Z794 578 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 BMPERQ8N8U9 685 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 OR56A1Q8NGH5 318 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 CASTOR1Q8WTX7 329 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 OBP2AQ9NY56 170 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 SERGEFQ9UGK8 458 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 PLEKHM1Q9Y4G2 1056 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 ATG4BQ9Y4P1 393 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 PCDHGA5Q9Y5G8 931 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 PLXND1Q9Y4D7 1925 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 AK4P27144 223 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 CERS1P27544 350 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 NRG3P56975 720 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 FOXK2Q01167 660 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 TRAM1Q15629 374 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 PRAMEF17Q5VTA0 474 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 OLFML2AQ68BL7 652 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 ABHD17CQ6PCB6 329 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 ZNF627Q7L945 461 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 SLC16A13Q7RTY0 426 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 OR2L5Q8NG80 312 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 PAQR8Q8TEZ7 354 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 MS4A6EQ96DS6 147 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 PEX11GQ96HA9 241 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 CMSS1Q9BQ75 279 aaKnown RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 DNTTIP1Q9H147 329 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 RSPH9Q9H1X1 276 aaPredicted RBP8.88□□□□□ -0.99
VCAN-210ENST00000513960 TRPV4Q9HBA0 871 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 SLC22A11Q9NSA0 550 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 NPFFR2Q9Y5X5 522 aa8.88□□□□□ -0.99
VCAN-210ENST00000513960 KNL1Q8NG31 2342 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 TRAV18A0A075B6X5 111 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 IGKV1-8A0A0C4DH67 115 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 A0A1W2PQU0 124 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 A0A1W2PR48 441 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 PLSCR5A0PG75 271 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 IDSB3KWA1 339 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 HIST1H2ABP04908 130 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 CA3P07451 260 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 APEHP13798 732 aaKnown RBP8.87□□□□□ -0.99
VCAN-210ENST00000513960 CDK2P24941 298 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 DYRK1AQ13627 763 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 DCAF12L2Q5VW00 463 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 ZNF776Q68DI1 518 aaPredicted RBP8.87□□□□□ -0.99
VCAN-210ENST00000513960 TFAP2EQ6VUC0 442 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 TMEM64Q6YI46 380 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 MBOAT2Q6ZWT7 520 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 HIST3H2AQ7L7L0 130 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 HIST1H2ACQ93077 130 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 MOAP1Q96BY2 351 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 IGFLR1Q9H665 355 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 BCL2L10Q9HD36 194 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 C20orf141Q9NUB4 165 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 ACAD8Q9UKU7 415 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 MED31Q9Y3C7 131 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 HEATR5BQ9P2D3 2071 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 TBC1D3DA0A087WVF3 549 aa8.87□□□□□ -0.99
VCAN-210ENST00000513960 TBC1D3IA0A087WXS9 549 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms